Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
COL8A2P25067 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
COL8A2P25067 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
COL8A2P25067 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
COL8A2P25067 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
COL8A2P25067 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
COL8A2P25067 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
COL8A2P25067 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
COL8A2P25067 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
COL8A2P25067 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC13.07□□□□□ -0.32
COL8A2P25067 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
COL8A2P25067 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC13.07□□□□□ -0.32
COL8A2P25067 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
COL8A2P25067 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
COL8A2P25067 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
COL8A2P25067 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
COL8A2P25067 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
COL8A2P25067 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC13.07□□□□□ -0.32
COL8A2P25067 KRT43P-201ENST00000434019 910 ntBASIC13.07□□□□□ -0.32
COL8A2P25067 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC13.07□□□□□ -0.32
COL8A2P25067 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC13.07□□□□□ -0.32
COL8A2P25067 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
COL8A2P25067 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
COL8A2P25067 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC13.07□□□□□ -0.32
COL8A2P25067 AC068587.3-201ENST00000526613 355 ntBASIC13.07□□□□□ -0.32
COL8A2P25067 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC13.07□□□□□ -0.32
COL8A2P25067 AC009486.1-201ENST00000569860 813 ntBASIC13.07□□□□□ -0.32
COL8A2P25067 NAA38-206ENST00000576384 424 ntTSL 2 BASIC13.07□□□□□ -0.32
COL8A2P25067 IFT20-206ENST00000578122 834 ntTSL 2 BASIC13.07□□□□□ -0.32
COL8A2P25067 IFT20-208ENST00000578985 831 ntTSL 3 BASIC13.07□□□□□ -0.32
COL8A2P25067 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC13.07□□□□□ -0.32
COL8A2P25067 WNT11-204ENST00000621122 789 ntTSL 5 BASIC13.07□□□□□ -0.32
COL8A2P25067 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
COL8A2P25067 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
COL8A2P25067 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
COL8A2P25067 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
COL8A2P25067 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
COL8A2P25067 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
COL8A2P25067 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC13.07□□□□□ -0.32
COL8A2P25067 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
COL8A2P25067 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
COL8A2P25067 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
COL8A2P25067 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
COL8A2P25067 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
COL8A2P25067 CICP13-201ENST00000422015 2789 ntBASIC13.07□□□□□ -0.32
COL8A2P25067 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
COL8A2P25067 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
COL8A2P25067 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
COL8A2P25067 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
COL8A2P25067 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
COL8A2P25067 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
COL8A2P25067 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
COL8A2P25067 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
COL8A2P25067 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC13.06□□□□□ -0.32
COL8A2P25067 AC127383.1-201ENST00000444697 1800 ntBASIC13.06□□□□□ -0.32
COL8A2P25067 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
COL8A2P25067 TP73-213ENST00000604479 1623 ntTSL 5 BASIC13.06□□□□□ -0.32
COL8A2P25067 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
COL8A2P25067 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
COL8A2P25067 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
COL8A2P25067 AGER-206ENST00000375070 1463 ntTSL 5 BASIC13.06□□□□□ -0.32
COL8A2P25067 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
COL8A2P25067 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
COL8A2P25067 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
COL8A2P25067 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
COL8A2P25067 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
COL8A2P25067 LBX2-201ENST00000341396 886 ntTSL 3 BASIC13.06□□□□□ -0.32
COL8A2P25067 TEX30-203ENST00000376022 828 ntTSL 2 BASIC13.06□□□□□ -0.32
COL8A2P25067 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC13.06□□□□□ -0.32
COL8A2P25067 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC13.06□□□□□ -0.32
COL8A2P25067 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
COL8A2P25067 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC13.06□□□□□ -0.32
COL8A2P25067 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC13.06□□□□□ -0.32
COL8A2P25067 GAPDHP40-201ENST00000505218 1006 ntBASIC13.06□□□□□ -0.32
COL8A2P25067 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
COL8A2P25067 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC13.06□□□□□ -0.32
COL8A2P25067 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
COL8A2P25067 AC025181.2-201ENST00000606994 802 ntBASIC13.06□□□□□ -0.32
COL8A2P25067 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
COL8A2P25067 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC13.06□□□□□ -0.32
COL8A2P25067 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
COL8A2P25067 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
COL8A2P25067 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC13.06□□□□□ -0.32
COL8A2P25067 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC13.06□□□□□ -0.32
COL8A2P25067 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC13.06□□□□□ -0.32
COL8A2P25067 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC13.06□□□□□ -0.32
COL8A2P25067 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
COL8A2P25067 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
COL8A2P25067 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
COL8A2P25067 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
COL8A2P25067 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC13.06□□□□□ -0.32
COL8A2P25067 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
COL8A2P25067 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
COL8A2P25067 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
COL8A2P25067 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
COL8A2P25067 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
COL8A2P25067 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
COL8A2P25067 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC13.05□□□□□ -0.32
COL8A2P25067 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
COL8A2P25067 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms