Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC13.77□□□□□ -0.21
APOC1P02654 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC13.77□□□□□ -0.21
APOC1P02654 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC13.77□□□□□ -0.21
APOC1P02654 AC023908.3-201ENST00000564211 3047 ntBASIC13.77□□□□□ -0.21
APOC1P02654 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
APOC1P02654 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC13.77□□□□□ -0.21
APOC1P02654 AC126365.1-201ENST00000578585 1514 ntBASIC13.77□□□□□ -0.21
APOC1P02654 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC13.77□□□□□ -0.21
APOC1P02654 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC13.77□□□□□ -0.21
APOC1P02654 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
APOC1P02654 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC13.77□□□□□ -0.21
APOC1P02654 AL671883.3-201ENST00000603274 991 ntBASIC13.77□□□□□ -0.21
APOC1P02654 AC097359.3-201ENST00000603982 1210 ntBASIC13.77□□□□□ -0.21
APOC1P02654 RN7SL828P-201ENST00000607615 303 ntBASIC13.77□□□□□ -0.21
APOC1P02654 AC005089.1-201ENST00000619486 2241 ntBASIC13.77□□□□□ -0.21
APOC1P02654 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
APOC1P02654 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
APOC1P02654 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
APOC1P02654 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
APOC1P02654 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC13.77□□□□□ -0.21
APOC1P02654 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
APOC1P02654 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.21
APOC1P02654 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
APOC1P02654 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
APOC1P02654 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
APOC1P02654 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
APOC1P02654 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
APOC1P02654 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
APOC1P02654 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
APOC1P02654 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
APOC1P02654 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC13.76□□□□□ -0.21
APOC1P02654 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC13.76□□□□□ -0.21
APOC1P02654 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC13.76□□□□□ -0.21
APOC1P02654 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC13.76□□□□□ -0.21
APOC1P02654 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC13.76□□□□□ -0.21
APOC1P02654 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
APOC1P02654 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC13.76□□□□□ -0.21
APOC1P02654 AC007686.3-201ENST00000619017 3487 ntBASIC13.76□□□□□ -0.21
APOC1P02654 TET3-201ENST00000305799 5174 ntTSL 5 BASIC13.76□□□□□ -0.21
APOC1P02654 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
APOC1P02654 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
APOC1P02654 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
APOC1P02654 CICP20-201ENST00000443330 2801 ntBASIC13.76□□□□□ -0.21
APOC1P02654 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC13.76□□□□□ -0.21
APOC1P02654 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC13.76□□□□□ -0.21
APOC1P02654 KRT8P12-202ENST00000472924 1397 ntBASIC13.76□□□□□ -0.21
APOC1P02654 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
APOC1P02654 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
APOC1P02654 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
APOC1P02654 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC13.76□□□□□ -0.21
APOC1P02654 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
APOC1P02654 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
APOC1P02654 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC13.76□□□□□ -0.21
APOC1P02654 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC13.76□□□□□ -0.21
APOC1P02654 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
APOC1P02654 CD81-202ENST00000381036 880 ntTSL 3 BASIC13.76□□□□□ -0.21
APOC1P02654 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC13.76□□□□□ -0.21
APOC1P02654 AZGP1P1-201ENST00000411909 902 ntBASIC13.76□□□□□ -0.21
APOC1P02654 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC13.76□□□□□ -0.21
APOC1P02654 AC254562.1-201ENST00000417586 456 ntBASIC13.76□□□□□ -0.21
APOC1P02654 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC13.76□□□□□ -0.21
APOC1P02654 FAM58DP-201ENST00000428076 619 ntBASIC13.76□□□□□ -0.21
APOC1P02654 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
APOC1P02654 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC13.76□□□□□ -0.21
APOC1P02654 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC13.76□□□□□ -0.21
APOC1P02654 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC13.76□□□□□ -0.21
APOC1P02654 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
APOC1P02654 AC026150.2-201ENST00000564693 1156 ntBASIC13.76□□□□□ -0.21
APOC1P02654 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC13.76□□□□□ -0.21
APOC1P02654 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC13.76□□□□□ -0.21
APOC1P02654 AP001059.3-201ENST00000619053 235 ntBASIC13.76□□□□□ -0.21
APOC1P02654 MIR6069-201ENST00000620069 79 ntBASIC13.76□□□□□ -0.21
APOC1P02654 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
APOC1P02654 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
APOC1P02654 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
APOC1P02654 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
APOC1P02654 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
APOC1P02654 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
APOC1P02654 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC13.76□□□□□ -0.21
APOC1P02654 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
APOC1P02654 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
APOC1P02654 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
APOC1P02654 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
APOC1P02654 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
APOC1P02654 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
APOC1P02654 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC13.76□□□□□ -0.21
APOC1P02654 ELK1-201ENST00000247161 2695 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
APOC1P02654 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
APOC1P02654 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
APOC1P02654 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC13.76□□□□□ -0.21
APOC1P02654 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
APOC1P02654 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC13.76□□□□□ -0.21
APOC1P02654 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
APOC1P02654 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC13.76□□□□□ -0.21
APOC1P02654 AL023775.1-201ENST00000454907 1746 ntBASIC13.76□□□□□ -0.21
APOC1P02654 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC13.76□□□□□ -0.21
APOC1P02654 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
APOC1P02654 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
APOC1P02654 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
APOC1P02654 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC13.75□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 69.5 ms