Protein–RNA interactions for Protein: P01903

HLA-DRA, HLA class II histocompatibility antigen, DR alpha chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRAP01903 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HLA-DRAP01903 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC16.6■□□□□ 0.25
HLA-DRAP01903 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HLA-DRAP01903 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
HLA-DRAP01903 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HLA-DRAP01903 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
HLA-DRAP01903 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
HLA-DRAP01903 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HLA-DRAP01903 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
HLA-DRAP01903 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HLA-DRAP01903 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HLA-DRAP01903 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HLA-DRAP01903 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HLA-DRAP01903 REXO1L4P-201ENST00000605109 1937 ntBASIC16.59■□□□□ 0.25
HLA-DRAP01903 NORAD-201ENST00000565493 5339 ntBASIC16.59■□□□□ 0.25
HLA-DRAP01903 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HLA-DRAP01903 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC16.59■□□□□ 0.25
HLA-DRAP01903 CALY-203ENST00000368558 825 ntTSL 5 BASIC16.59■□□□□ 0.25
HLA-DRAP01903 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HLA-DRAP01903 C1QBPP1-201ENST00000400117 770 ntBASIC16.59■□□□□ 0.25
HLA-DRAP01903 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HLA-DRAP01903 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC16.59■□□□□ 0.25
HLA-DRAP01903 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC16.59■□□□□ 0.25
HLA-DRAP01903 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HLA-DRAP01903 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC16.59■□□□□ 0.25
HLA-DRAP01903 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC16.59■□□□□ 0.25
HLA-DRAP01903 COX11-202ENST00000571584 1108 ntTSL 2 BASIC16.59■□□□□ 0.25
HLA-DRAP01903 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC16.59■□□□□ 0.25
HLA-DRAP01903 MIR3197-201ENST00000582241 73 ntBASIC16.59■□□□□ 0.25
HLA-DRAP01903 AC093813.1-201ENST00000605066 256 ntBASIC16.59■□□□□ 0.25
HLA-DRAP01903 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HLA-DRAP01903 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC16.59■□□□□ 0.25
HLA-DRAP01903 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC16.59■□□□□ 0.25
HLA-DRAP01903 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HLA-DRAP01903 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HLA-DRAP01903 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
HLA-DRAP01903 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HLA-DRAP01903 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC16.59■□□□□ 0.25
HLA-DRAP01903 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
HLA-DRAP01903 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
HLA-DRAP01903 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
HLA-DRAP01903 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HLA-DRAP01903 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
HLA-DRAP01903 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
HLA-DRAP01903 AP000845.1-201ENST00000581677 2131 ntBASIC16.58■□□□□ 0.25
HLA-DRAP01903 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC16.58■□□□□ 0.25
HLA-DRAP01903 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
HLA-DRAP01903 AL359258.3-201ENST00000622910 2331 ntBASIC16.58■□□□□ 0.25
HLA-DRAP01903 TCAF2P1-201ENST00000291129 2421 ntBASIC16.58■□□□□ 0.25
HLA-DRAP01903 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
HLA-DRAP01903 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
HLA-DRAP01903 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
HLA-DRAP01903 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC16.58■□□□□ 0.25
HLA-DRAP01903 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HLA-DRAP01903 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HLA-DRAP01903 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
HLA-DRAP01903 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HLA-DRAP01903 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HLA-DRAP01903 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HLA-DRAP01903 LHX6-205ENST00000464484 666 ntTSL 2 BASIC16.58■□□□□ 0.24
HLA-DRAP01903 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HLA-DRAP01903 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC16.58■□□□□ 0.24
HLA-DRAP01903 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC16.58■□□□□ 0.24
HLA-DRAP01903 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC16.58■□□□□ 0.24
HLA-DRAP01903 INO80C-210ENST00000590757 595 ntTSL 2 BASIC16.58■□□□□ 0.24
HLA-DRAP01903 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC16.58■□□□□ 0.24
HLA-DRAP01903 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HLA-DRAP01903 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC16.58■□□□□ 0.24
HLA-DRAP01903 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC16.58■□□□□ 0.24
HLA-DRAP01903 WFDC1-204ENST00000613603 549 ntBASIC16.58■□□□□ 0.24
HLA-DRAP01903 NID2-208ENST00000617139 3827 ntTSL 5 BASIC16.58■□□□□ 0.24
HLA-DRAP01903 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
HLA-DRAP01903 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HLA-DRAP01903 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC16.58■□□□□ 0.24
HLA-DRAP01903 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HLA-DRAP01903 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
HLA-DRAP01903 AC007787.1-201ENST00000588095 1583 ntBASIC16.58■□□□□ 0.24
HLA-DRAP01903 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC16.58■□□□□ 0.24
HLA-DRAP01903 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC16.58■□□□□ 0.24
HLA-DRAP01903 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HLA-DRAP01903 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HLA-DRAP01903 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC16.58■□□□□ 0.24
HLA-DRAP01903 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HLA-DRAP01903 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
HLA-DRAP01903 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC16.58■□□□□ 0.24
HLA-DRAP01903 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HLA-DRAP01903 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
HLA-DRAP01903 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
HLA-DRAP01903 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
HLA-DRAP01903 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HLA-DRAP01903 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC16.57■□□□□ 0.24
HLA-DRAP01903 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
HLA-DRAP01903 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC16.57■□□□□ 0.24
HLA-DRAP01903 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HLA-DRAP01903 AGAP7P-201ENST00000582299 2062 ntBASIC16.57■□□□□ 0.24
HLA-DRAP01903 AGAP14-201ENST00000624701 2060 ntBASIC16.57■□□□□ 0.24
HLA-DRAP01903 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
HLA-DRAP01903 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
HLA-DRAP01903 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
HLA-DRAP01903 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 66.2 ms