Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC22.59■■□□□ 1.21
RAPGEF3O95398 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC22.58■■□□□ 1.21
RAPGEF3O95398 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
RAPGEF3O95398 SGCA-201ENST00000262018 1432 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
RAPGEF3O95398 PRPF18-202ENST00000378572 1717 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
RAPGEF3O95398 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
RAPGEF3O95398 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
RAPGEF3O95398 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC22.58■■□□□ 1.21
RAPGEF3O95398 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC22.58■■□□□ 1.21
RAPGEF3O95398 CST1-201ENST00000304749 760 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
RAPGEF3O95398 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC22.58■■□□□ 1.21
RAPGEF3O95398 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
RAPGEF3O95398 RPSAP15-201ENST00000448168 861 ntBASIC22.58■■□□□ 1.21
RAPGEF3O95398 ORAOV1P1-201ENST00000503108 395 ntBASIC22.58■■□□□ 1.21
RAPGEF3O95398 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC22.58■■□□□ 1.21
RAPGEF3O95398 AP000911.2-201ENST00000534330 502 ntBASIC22.58■■□□□ 1.21
RAPGEF3O95398 CR383656.3-201ENST00000551315 183 ntBASIC22.58■■□□□ 1.21
RAPGEF3O95398 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC22.58■■□□□ 1.21
RAPGEF3O95398 AC011481.2-201ENST00000585408 426 ntTSL 3 BASIC22.58■■□□□ 1.21
RAPGEF3O95398 AC018695.6-201ENST00000614011 534 ntBASIC22.58■■□□□ 1.21
RAPGEF3O95398 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC22.58■■□□□ 1.21
RAPGEF3O95398 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
RAPGEF3O95398 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC22.58■■□□□ 1.21
RAPGEF3O95398 GNAO1-205ENST00000563661 1351 ntTSL 2 BASIC22.58■■□□□ 1.21
RAPGEF3O95398 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC22.58■■□□□ 1.2
RAPGEF3O95398 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC22.58■■□□□ 1.2
RAPGEF3O95398 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
RAPGEF3O95398 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC22.58■■□□□ 1.2
RAPGEF3O95398 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
RAPGEF3O95398 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
RAPGEF3O95398 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
RAPGEF3O95398 AC144522.1-201ENST00000625111 1658 ntBASIC22.58■■□□□ 1.2
RAPGEF3O95398 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
RAPGEF3O95398 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
RAPGEF3O95398 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
RAPGEF3O95398 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
RAPGEF3O95398 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC22.57■■□□□ 1.2
RAPGEF3O95398 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
RAPGEF3O95398 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
RAPGEF3O95398 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
RAPGEF3O95398 AC069224.1-201ENST00000566372 1715 ntBASIC22.57■■□□□ 1.2
RAPGEF3O95398 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
RAPGEF3O95398 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
RAPGEF3O95398 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC22.57■■□□□ 1.2
RAPGEF3O95398 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
RAPGEF3O95398 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
RAPGEF3O95398 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
RAPGEF3O95398 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC22.57■■□□□ 1.2
RAPGEF3O95398 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC22.57■■□□□ 1.2
RAPGEF3O95398 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
RAPGEF3O95398 SIX3-AS1-202ENST00000456467 557 ntTSL 2 BASIC22.57■■□□□ 1.2
RAPGEF3O95398 APOPT1-209ENST00000492189 513 ntTSL 3 BASIC22.57■■□□□ 1.2
RAPGEF3O95398 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
RAPGEF3O95398 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
RAPGEF3O95398 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC22.57■■□□□ 1.2
RAPGEF3O95398 AC010335.1-201ENST00000594590 599 ntTSL 3 BASIC22.57■■□□□ 1.2
RAPGEF3O95398 AC011500.3-201ENST00000594676 647 ntTSL 4 BASIC22.57■■□□□ 1.2
RAPGEF3O95398 TMIGD2-204ENST00000600349 333 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
RAPGEF3O95398 AC007326.1-201ENST00000604539 458 ntBASIC22.57■■□□□ 1.2
RAPGEF3O95398 AL356417.2-202ENST00000608986 532 ntTSL 3 BASIC22.57■■□□□ 1.2
RAPGEF3O95398 AC073592.2-201ENST00000623062 780 ntBASIC22.57■■□□□ 1.2
RAPGEF3O95398 AC002472.4-201ENST00000641915 272 ntBASIC22.57■■□□□ 1.2
RAPGEF3O95398 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC22.57■■□□□ 1.2
RAPGEF3O95398 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC22.57■■□□□ 1.2
RAPGEF3O95398 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
RAPGEF3O95398 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
RAPGEF3O95398 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
RAPGEF3O95398 AC006449.5-201ENST00000610658 2098 ntBASIC22.57■■□□□ 1.2
RAPGEF3O95398 HTR7P1-202ENST00000624664 4411 ntBASIC22.57■■□□□ 1.2
RAPGEF3O95398 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
RAPGEF3O95398 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
RAPGEF3O95398 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
RAPGEF3O95398 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
RAPGEF3O95398 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
RAPGEF3O95398 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
RAPGEF3O95398 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
RAPGEF3O95398 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
RAPGEF3O95398 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
RAPGEF3O95398 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
RAPGEF3O95398 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
RAPGEF3O95398 BCAS2P2-201ENST00000425064 674 ntBASIC22.56■■□□□ 1.2
RAPGEF3O95398 AL157407.1-201ENST00000435784 904 ntBASIC22.56■■□□□ 1.2
RAPGEF3O95398 FTH1P22-201ENST00000456305 520 ntBASIC22.56■■□□□ 1.2
RAPGEF3O95398 RN7SL81P-201ENST00000493781 261 ntBASIC22.56■■□□□ 1.2
RAPGEF3O95398 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC22.56■■□□□ 1.2
RAPGEF3O95398 NEU3-207ENST00000534628 746 ntTSL 2 BASIC22.56■■□□□ 1.2
RAPGEF3O95398 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
RAPGEF3O95398 NUDT4P2-201ENST00000578341 546 ntBASIC22.56■■□□□ 1.2
RAPGEF3O95398 AC138466.5-201ENST00000624002 808 ntBASIC22.56■■□□□ 1.2
RAPGEF3O95398 AL606763.1-201ENST00000629535 462 ntTSL 3 BASIC22.56■■□□□ 1.2
RAPGEF3O95398 DDX5-235ENST00000630471 473 ntTSL 4 BASIC22.56■■□□□ 1.2
RAPGEF3O95398 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC22.56■■□□□ 1.2
RAPGEF3O95398 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC22.56■■□□□ 1.2
RAPGEF3O95398 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
RAPGEF3O95398 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
RAPGEF3O95398 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
RAPGEF3O95398 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
RAPGEF3O95398 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC22.56■■□□□ 1.2
RAPGEF3O95398 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC22.56■■□□□ 1.2
RAPGEF3O95398 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 60.6 ms