Protein–RNA interactions for Protein: O60264

SMARCA5, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5, humanhuman

Predicted RBP Predictions only

Length 1,052 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5O60264 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC19.06■□□□□ 0.64
SMARCA5O60264 GHSR-202ENST00000427970 912 ntBASIC19.06■□□□□ 0.64
SMARCA5O60264 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC19.06■□□□□ 0.64
SMARCA5O60264 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC19.06■□□□□ 0.64
SMARCA5O60264 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SMARCA5O60264 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SMARCA5O60264 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC19.06■□□□□ 0.64
SMARCA5O60264 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC19.06■□□□□ 0.64
SMARCA5O60264 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SMARCA5O60264 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC19.06■□□□□ 0.64
SMARCA5O60264 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC19.06■□□□□ 0.64
SMARCA5O60264 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC19.06■□□□□ 0.64
SMARCA5O60264 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC19.06■□□□□ 0.64
SMARCA5O60264 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC19.06■□□□□ 0.64
SMARCA5O60264 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SMARCA5O60264 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SMARCA5O60264 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC19.06■□□□□ 0.64
SMARCA5O60264 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SMARCA5O60264 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
SMARCA5O60264 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SMARCA5O60264 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SMARCA5O60264 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SMARCA5O60264 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SMARCA5O60264 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SMARCA5O60264 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC19.05■□□□□ 0.64
SMARCA5O60264 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SMARCA5O60264 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SMARCA5O60264 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SMARCA5O60264 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SMARCA5O60264 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC19.05■□□□□ 0.64
SMARCA5O60264 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SMARCA5O60264 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SMARCA5O60264 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC19.05■□□□□ 0.64
SMARCA5O60264 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC19.05■□□□□ 0.64
SMARCA5O60264 FAM207CP-201ENST00000443486 507 ntBASIC19.05■□□□□ 0.64
SMARCA5O60264 GALT-202ENST00000450095 1280 ntTSL 2 BASIC19.05■□□□□ 0.64
SMARCA5O60264 AC093004.1-201ENST00000508850 424 ntBASIC19.05■□□□□ 0.64
SMARCA5O60264 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC19.05■□□□□ 0.64
SMARCA5O60264 AC055876.2-201ENST00000531834 546 ntBASIC19.05■□□□□ 0.64
SMARCA5O60264 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
SMARCA5O60264 WASH4P-201ENST00000564273 1246 ntBASIC19.05■□□□□ 0.64
SMARCA5O60264 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC19.05■□□□□ 0.64
SMARCA5O60264 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC19.05■□□□□ 0.64
SMARCA5O60264 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SMARCA5O60264 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC19.05■□□□□ 0.64
SMARCA5O60264 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SMARCA5O60264 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SMARCA5O60264 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SMARCA5O60264 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC19.05■□□□□ 0.64
SMARCA5O60264 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SMARCA5O60264 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SMARCA5O60264 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SMARCA5O60264 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SMARCA5O60264 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
SMARCA5O60264 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
SMARCA5O60264 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SMARCA5O60264 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
SMARCA5O60264 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
SMARCA5O60264 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
SMARCA5O60264 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
SMARCA5O60264 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SMARCA5O60264 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
SMARCA5O60264 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SMARCA5O60264 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
SMARCA5O60264 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SMARCA5O60264 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC19.04■□□□□ 0.64
SMARCA5O60264 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
SMARCA5O60264 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SMARCA5O60264 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SMARCA5O60264 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
SMARCA5O60264 METTL26-204ENST00000397665 558 ntTSL 2 BASIC19.04■□□□□ 0.64
SMARCA5O60264 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC19.04■□□□□ 0.64
SMARCA5O60264 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
SMARCA5O60264 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SMARCA5O60264 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
SMARCA5O60264 AC123567.1-201ENST00000548294 1261 ntBASIC19.04■□□□□ 0.64
SMARCA5O60264 CDK4-206ENST00000549606 558 ntTSL 2 BASIC19.04■□□□□ 0.64
SMARCA5O60264 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC19.04■□□□□ 0.64
SMARCA5O60264 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC19.04■□□□□ 0.64
SMARCA5O60264 AC107373.2-201ENST00000607735 490 ntBASIC19.04■□□□□ 0.64
SMARCA5O60264 AJ011931.1-201ENST00000618749 2492 ntBASIC19.04■□□□□ 0.64
SMARCA5O60264 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SMARCA5O60264 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
SMARCA5O60264 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SMARCA5O60264 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC19.04■□□□□ 0.64
SMARCA5O60264 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC19.03■□□□□ 0.64
SMARCA5O60264 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC19.03■□□□□ 0.64
SMARCA5O60264 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SMARCA5O60264 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
SMARCA5O60264 COCH-203ENST00000460581 2688 ntTSL 2 BASIC19.03■□□□□ 0.64
SMARCA5O60264 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC19.03■□□□□ 0.64
SMARCA5O60264 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SMARCA5O60264 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC19.03■□□□□ 0.64
SMARCA5O60264 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SMARCA5O60264 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SMARCA5O60264 AL157414.3-201ENST00000624276 1954 ntBASIC19.03■□□□□ 0.64
SMARCA5O60264 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SMARCA5O60264 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC19.03■□□□□ 0.64
SMARCA5O60264 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC19.03■□□□□ 0.64
SMARCA5O60264 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms