Protein–RNA interactions for Protein: O00311

CDC7, Cell division cycle 7-related protein kinase, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7O00311 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CDC7O00311 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CDC7O00311 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC15.2■□□□□ 0.02
CDC7O00311 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC15.2■□□□□ 0.02
CDC7O00311 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CDC7O00311 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
CDC7O00311 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CDC7O00311 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
CDC7O00311 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CDC7O00311 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CDC7O00311 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CDC7O00311 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC15.2■□□□□ 0.02
CDC7O00311 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC15.2■□□□□ 0.02
CDC7O00311 PON3-203ENST00000427422 894 ntTSL 3 BASIC15.2■□□□□ 0.02
CDC7O00311 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC15.2■□□□□ 0.02
CDC7O00311 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
CDC7O00311 AC009477.1-201ENST00000452936 217 ntBASIC15.2■□□□□ 0.02
CDC7O00311 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC15.2■□□□□ 0.02
CDC7O00311 AC009407.1-201ENST00000568958 598 ntBASIC15.2■□□□□ 0.02
CDC7O00311 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC15.2■□□□□ 0.02
CDC7O00311 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC15.2■□□□□ 0.02
CDC7O00311 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC15.2■□□□□ 0.02
CDC7O00311 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CDC7O00311 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
CDC7O00311 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CDC7O00311 AC013726.1-201ENST00000563747 2285 ntBASIC15.2■□□□□ 0.02
CDC7O00311 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CDC7O00311 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
CDC7O00311 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC15.2■□□□□ 0.02
CDC7O00311 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC15.2■□□□□ 0.02
CDC7O00311 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CDC7O00311 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC15.2■□□□□ 0.02
CDC7O00311 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CDC7O00311 COCH-203ENST00000460581 2688 ntTSL 2 BASIC15.2■□□□□ 0.02
CDC7O00311 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CDC7O00311 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC15.19■□□□□ 0.02
CDC7O00311 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CDC7O00311 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC15.19■□□□□ 0.02
CDC7O00311 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CDC7O00311 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CDC7O00311 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC15.19■□□□□ 0.02
CDC7O00311 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CDC7O00311 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CDC7O00311 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CDC7O00311 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CDC7O00311 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CDC7O00311 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CDC7O00311 LINC01101-201ENST00000622953 1884 ntBASIC15.19■□□□□ 0.02
CDC7O00311 PCDHGB8P-201ENST00000502926 1973 ntBASIC15.19■□□□□ 0.02
CDC7O00311 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
CDC7O00311 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
CDC7O00311 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CDC7O00311 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CDC7O00311 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CDC7O00311 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CDC7O00311 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC15.19■□□□□ 0.02
CDC7O00311 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC15.19■□□□□ 0.02
CDC7O00311 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC15.19■□□□□ 0.02
CDC7O00311 AC114501.2-201ENST00000439631 535 ntBASIC15.19■□□□□ 0.02
CDC7O00311 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC15.19■□□□□ 0.02
CDC7O00311 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC15.19■□□□□ 0.02
CDC7O00311 5S_rRNA.22-201ENST00000614916 106 ntBASIC15.19■□□□□ 0.02
CDC7O00311 AC093512.1-201ENST00000617969 520 ntBASIC15.19■□□□□ 0.02
CDC7O00311 REXO1L2P-201ENST00000425429 2069 ntBASIC15.19■□□□□ 0.02
CDC7O00311 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CDC7O00311 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CDC7O00311 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CDC7O00311 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CDC7O00311 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
CDC7O00311 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
CDC7O00311 AC007686.3-201ENST00000619017 3487 ntBASIC15.19■□□□□ 0.02
CDC7O00311 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CDC7O00311 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC15.19■□□□□ 0.02
CDC7O00311 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CDC7O00311 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CDC7O00311 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDC7O00311 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC15.18■□□□□ 0.02
CDC7O00311 ACE3P-201ENST00000423435 1973 ntBASIC15.18■□□□□ 0.02
CDC7O00311 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDC7O00311 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CDC7O00311 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDC7O00311 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC15.18■□□□□ 0.02
CDC7O00311 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CDC7O00311 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDC7O00311 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDC7O00311 AC099063.4-201ENST00000641099 1602 ntBASIC15.18■□□□□ 0.02
CDC7O00311 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDC7O00311 FGD5P1-202ENST00000614866 2498 ntBASIC15.18■□□□□ 0.02
CDC7O00311 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CDC7O00311 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDC7O00311 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDC7O00311 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDC7O00311 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC15.18■□□□□ 0.02
CDC7O00311 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDC7O00311 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDC7O00311 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
CDC7O00311 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC15.18■□□□□ 0.02
CDC7O00311 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CDC7O00311 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC15.18■□□□□ 0.02
CDC7O00311 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC15.18■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms