Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
TCRBV4S1A1TA0A5B7 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
TCRBV4S1A1TA0A5B7 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC12.5□□□□□ -0.41
TCRBV4S1A1TA0A5B7 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC12.5□□□□□ -0.41
TCRBV4S1A1TA0A5B7 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
TCRBV4S1A1TA0A5B7 PTPA-220ENST00000436883 532 ntTSL 4 BASIC12.5□□□□□ -0.41
TCRBV4S1A1TA0A5B7 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC12.5□□□□□ -0.41
TCRBV4S1A1TA0A5B7 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
TCRBV4S1A1TA0A5B7 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC12.5□□□□□ -0.41
TCRBV4S1A1TA0A5B7 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC12.5□□□□□ -0.41
TCRBV4S1A1TA0A5B7 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
TCRBV4S1A1TA0A5B7 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC12.5□□□□□ -0.41
TCRBV4S1A1TA0A5B7 AC093004.1-201ENST00000508850 424 ntBASIC12.5□□□□□ -0.41
TCRBV4S1A1TA0A5B7 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
TCRBV4S1A1TA0A5B7 TIMM17BP1-201ENST00000545713 516 ntBASIC12.5□□□□□ -0.41
TCRBV4S1A1TA0A5B7 CR383656.12-201ENST00000549567 513 ntBASIC12.5□□□□□ -0.41
TCRBV4S1A1TA0A5B7 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC12.5□□□□□ -0.41
TCRBV4S1A1TA0A5B7 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC12.5□□□□□ -0.41
TCRBV4S1A1TA0A5B7 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC12.5□□□□□ -0.41
TCRBV4S1A1TA0A5B7 TEX48-202ENST00000612244 662 ntTSL 3 BASIC12.5□□□□□ -0.41
TCRBV4S1A1TA0A5B7 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC12.5□□□□□ -0.41
TCRBV4S1A1TA0A5B7 AL391825.1-201ENST00000457671 1364 ntBASIC12.5□□□□□ -0.41
TCRBV4S1A1TA0A5B7 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
TCRBV4S1A1TA0A5B7 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC12.5□□□□□ -0.41
TCRBV4S1A1TA0A5B7 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
TCRBV4S1A1TA0A5B7 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC12.5□□□□□ -0.41
TCRBV4S1A1TA0A5B7 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
TCRBV4S1A1TA0A5B7 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC12.5□□□□□ -0.41
TCRBV4S1A1TA0A5B7 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC12.5□□□□□ -0.41
TCRBV4S1A1TA0A5B7 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TCRBV4S1A1TA0A5B7 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TCRBV4S1A1TA0A5B7 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
TCRBV4S1A1TA0A5B7 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
TCRBV4S1A1TA0A5B7 FLII-221ENST00000578558 2377 ntTSL 5 BASIC12.5□□□□□ -0.41
TCRBV4S1A1TA0A5B7 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC12.5□□□□□ -0.41
TCRBV4S1A1TA0A5B7 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
TCRBV4S1A1TA0A5B7 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
TCRBV4S1A1TA0A5B7 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TCRBV4S1A1TA0A5B7 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TCRBV4S1A1TA0A5B7 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
TCRBV4S1A1TA0A5B7 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC12.5□□□□□ -0.41
TCRBV4S1A1TA0A5B7 AL365209.1-201ENST00000624418 6473 ntBASIC12.5□□□□□ -0.41
TCRBV4S1A1TA0A5B7 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC12.49□□□□□ -0.41
TCRBV4S1A1TA0A5B7 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
TCRBV4S1A1TA0A5B7 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
TCRBV4S1A1TA0A5B7 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TCRBV4S1A1TA0A5B7 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC12.49□□□□□ -0.41
TCRBV4S1A1TA0A5B7 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TCRBV4S1A1TA0A5B7 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC12.49□□□□□ -0.41
TCRBV4S1A1TA0A5B7 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC12.49□□□□□ -0.41
TCRBV4S1A1TA0A5B7 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TCRBV4S1A1TA0A5B7 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
TCRBV4S1A1TA0A5B7 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC12.49□□□□□ -0.41
TCRBV4S1A1TA0A5B7 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TCRBV4S1A1TA0A5B7 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC12.49□□□□□ -0.41
TCRBV4S1A1TA0A5B7 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
TCRBV4S1A1TA0A5B7 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TCRBV4S1A1TA0A5B7 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TCRBV4S1A1TA0A5B7 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
TCRBV4S1A1TA0A5B7 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TCRBV4S1A1TA0A5B7 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
TCRBV4S1A1TA0A5B7 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
TCRBV4S1A1TA0A5B7 ZBTB45P2-201ENST00000452245 1531 ntBASIC12.49□□□□□ -0.41
TCRBV4S1A1TA0A5B7 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC12.49□□□□□ -0.41
TCRBV4S1A1TA0A5B7 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
TCRBV4S1A1TA0A5B7 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC12.49□□□□□ -0.41
TCRBV4S1A1TA0A5B7 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC12.49□□□□□ -0.41
TCRBV4S1A1TA0A5B7 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
TCRBV4S1A1TA0A5B7 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
TCRBV4S1A1TA0A5B7 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
TCRBV4S1A1TA0A5B7 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
TCRBV4S1A1TA0A5B7 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
TCRBV4S1A1TA0A5B7 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
TCRBV4S1A1TA0A5B7 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TCRBV4S1A1TA0A5B7 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
TCRBV4S1A1TA0A5B7 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC12.49□□□□□ -0.41
TCRBV4S1A1TA0A5B7 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC12.49□□□□□ -0.41
TCRBV4S1A1TA0A5B7 GK-202ENST00000378941 458 ntTSL 3 BASIC12.49□□□□□ -0.41
TCRBV4S1A1TA0A5B7 NME2P1-201ENST00000426182 414 ntBASIC12.49□□□□□ -0.41
TCRBV4S1A1TA0A5B7 RASL12-203ENST00000434605 982 ntTSL 2 BASIC12.49□□□□□ -0.41
TCRBV4S1A1TA0A5B7 AC114501.2-201ENST00000439631 535 ntBASIC12.49□□□□□ -0.41
TCRBV4S1A1TA0A5B7 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC12.49□□□□□ -0.41
TCRBV4S1A1TA0A5B7 ELP6-209ENST00000446787 894 ntTSL 3 BASIC12.49□□□□□ -0.41
TCRBV4S1A1TA0A5B7 CD81-207ENST00000481687 890 ntTSL 2 BASIC12.49□□□□□ -0.41
TCRBV4S1A1TA0A5B7 FXR1-221ENST00000491674 365 ntTSL 2 BASIC12.49□□□□□ -0.41
TCRBV4S1A1TA0A5B7 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC12.49□□□□□ -0.41
TCRBV4S1A1TA0A5B7 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TCRBV4S1A1TA0A5B7 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC12.49□□□□□ -0.41
TCRBV4S1A1TA0A5B7 TPRX2P-201ENST00000535362 881 ntBASIC12.49□□□□□ -0.41
TCRBV4S1A1TA0A5B7 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
TCRBV4S1A1TA0A5B7 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC12.49□□□□□ -0.41
TCRBV4S1A1TA0A5B7 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC12.49□□□□□ -0.41
TCRBV4S1A1TA0A5B7 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
TCRBV4S1A1TA0A5B7 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC12.49□□□□□ -0.41
TCRBV4S1A1TA0A5B7 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
TCRBV4S1A1TA0A5B7 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TCRBV4S1A1TA0A5B7 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
TCRBV4S1A1TA0A5B7 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TCRBV4S1A1TA0A5B7 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
TCRBV4S1A1TA0A5B7 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms