Protein–RNA interactions for Protein: Q9Y5F0

PCDHB13, Protocadherin beta-13, humanhuman

Predictions only

Length 798 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13Q9Y5F0 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHB13Q9Y5F0 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
PCDHB13Q9Y5F0 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC17.24■□□□□ 0.35
PCDHB13Q9Y5F0 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHB13Q9Y5F0 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHB13Q9Y5F0 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHB13Q9Y5F0 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
PCDHB13Q9Y5F0 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC17.24■□□□□ 0.35
PCDHB13Q9Y5F0 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHB13Q9Y5F0 KRT18P43-201ENST00000469825 1281 ntBASIC17.24■□□□□ 0.35
PCDHB13Q9Y5F0 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC17.24■□□□□ 0.35
PCDHB13Q9Y5F0 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC17.24■□□□□ 0.35
PCDHB13Q9Y5F0 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHB13Q9Y5F0 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHB13Q9Y5F0 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC17.24■□□□□ 0.35
PCDHB13Q9Y5F0 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
PCDHB13Q9Y5F0 AC104640.1-201ENST00000562617 2109 ntBASIC17.24■□□□□ 0.35
PCDHB13Q9Y5F0 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHB13Q9Y5F0 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
PCDHB13Q9Y5F0 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHB13Q9Y5F0 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHB13Q9Y5F0 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC17.24■□□□□ 0.35
PCDHB13Q9Y5F0 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
PCDHB13Q9Y5F0 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC17.23■□□□□ 0.35
PCDHB13Q9Y5F0 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHB13Q9Y5F0 AL355578.1-201ENST00000607405 1328 ntBASIC17.23■□□□□ 0.35
PCDHB13Q9Y5F0 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHB13Q9Y5F0 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC17.23■□□□□ 0.35
PCDHB13Q9Y5F0 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHB13Q9Y5F0 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHB13Q9Y5F0 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC17.23■□□□□ 0.35
PCDHB13Q9Y5F0 STK33-217ENST00000534493 1895 ntTSL 2 BASIC17.23■□□□□ 0.35
PCDHB13Q9Y5F0 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHB13Q9Y5F0 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
PCDHB13Q9Y5F0 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
PCDHB13Q9Y5F0 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC17.23■□□□□ 0.35
PCDHB13Q9Y5F0 PKIG-203ENST00000372887 769 ntTSL 3 BASIC17.23■□□□□ 0.35
PCDHB13Q9Y5F0 RPL5P21-201ENST00000404620 815 ntBASIC17.23■□□□□ 0.35
PCDHB13Q9Y5F0 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC17.23■□□□□ 0.35
PCDHB13Q9Y5F0 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC17.23■□□□□ 0.35
PCDHB13Q9Y5F0 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC17.23■□□□□ 0.35
PCDHB13Q9Y5F0 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHB13Q9Y5F0 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC17.23■□□□□ 0.35
PCDHB13Q9Y5F0 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHB13Q9Y5F0 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHB13Q9Y5F0 AL591767.1-201ENST00000557160 568 ntTSL 4 BASIC17.23■□□□□ 0.35
PCDHB13Q9Y5F0 MTND1P8-201ENST00000571424 950 ntBASIC17.23■□□□□ 0.35
PCDHB13Q9Y5F0 AP001198.2-201ENST00000593121 466 ntTSL 2 BASIC17.23■□□□□ 0.35
PCDHB13Q9Y5F0 RNA5-8SN1-201ENST00000610460 153 ntBASIC17.23■□□□□ 0.35
PCDHB13Q9Y5F0 RNA5-8SN5-202ENST00000612463 153 ntBASIC17.23■□□□□ 0.35
PCDHB13Q9Y5F0 RNA5-8SN4-201ENST00000613359 153 ntBASIC17.23■□□□□ 0.35
PCDHB13Q9Y5F0 RNA5-8SN5-201ENST00000619471 153 ntBASIC17.23■□□□□ 0.35
PCDHB13Q9Y5F0 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHB13Q9Y5F0 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHB13Q9Y5F0 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHB13Q9Y5F0 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHB13Q9Y5F0 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHB13Q9Y5F0 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC17.23■□□□□ 0.35
PCDHB13Q9Y5F0 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
PCDHB13Q9Y5F0 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHB13Q9Y5F0 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHB13Q9Y5F0 AC084364.1-201ENST00000551967 1556 ntBASIC17.23■□□□□ 0.35
PCDHB13Q9Y5F0 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHB13Q9Y5F0 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHB13Q9Y5F0 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
PCDHB13Q9Y5F0 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
PCDHB13Q9Y5F0 KC6-207ENST00000600644 2311 ntTSL 3 BASIC17.22■□□□□ 0.35
PCDHB13Q9Y5F0 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHB13Q9Y5F0 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHB13Q9Y5F0 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
PCDHB13Q9Y5F0 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHB13Q9Y5F0 AL121723.1-201ENST00000445194 1519 ntBASIC17.22■□□□□ 0.35
PCDHB13Q9Y5F0 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC17.22■□□□□ 0.35
PCDHB13Q9Y5F0 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHB13Q9Y5F0 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHB13Q9Y5F0 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHB13Q9Y5F0 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
PCDHB13Q9Y5F0 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHB13Q9Y5F0 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHB13Q9Y5F0 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
PCDHB13Q9Y5F0 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC17.22■□□□□ 0.35
PCDHB13Q9Y5F0 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHB13Q9Y5F0 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC17.22■□□□□ 0.35
PCDHB13Q9Y5F0 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC17.22■□□□□ 0.35
PCDHB13Q9Y5F0 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC17.22■□□□□ 0.35
PCDHB13Q9Y5F0 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC17.22■□□□□ 0.35
PCDHB13Q9Y5F0 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHB13Q9Y5F0 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHB13Q9Y5F0 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC17.22■□□□□ 0.35
PCDHB13Q9Y5F0 SPDYE18-201ENST00000510091 1050 ntBASIC17.22■□□□□ 0.35
PCDHB13Q9Y5F0 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHB13Q9Y5F0 RNF139-AS1-202ENST00000519861 359 ntTSL 3 BASIC17.22■□□□□ 0.35
PCDHB13Q9Y5F0 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHB13Q9Y5F0 AC011467.4-201ENST00000594891 528 ntBASIC17.22■□□□□ 0.35
PCDHB13Q9Y5F0 AL355385.1-201ENST00000606123 409 ntBASIC17.22■□□□□ 0.35
PCDHB13Q9Y5F0 AL096865.1-201ENST00000606796 927 ntBASIC17.22■□□□□ 0.35
PCDHB13Q9Y5F0 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC17.22■□□□□ 0.35
PCDHB13Q9Y5F0 AC006963.1-201ENST00000624003 1052 ntBASIC17.22■□□□□ 0.35
PCDHB13Q9Y5F0 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHB13Q9Y5F0 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms