Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NPC1L1Q9UHC9 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC20.53■□□□□ 0.88
NPC1L1Q9UHC9 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NPC1L1Q9UHC9 RN7SKP230-201ENST00000365642 335 ntBASIC20.53■□□□□ 0.88
NPC1L1Q9UHC9 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
NPC1L1Q9UHC9 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
NPC1L1Q9UHC9 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
NPC1L1Q9UHC9 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
NPC1L1Q9UHC9 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
NPC1L1Q9UHC9 PFAS-212ENST00000625942 396 ntTSL 5 BASIC20.53■□□□□ 0.88
NPC1L1Q9UHC9 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
NPC1L1Q9UHC9 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC20.53■□□□□ 0.88
NPC1L1Q9UHC9 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC20.53■□□□□ 0.88
NPC1L1Q9UHC9 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
NPC1L1Q9UHC9 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
NPC1L1Q9UHC9 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
NPC1L1Q9UHC9 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
NPC1L1Q9UHC9 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC20.52■□□□□ 0.88
NPC1L1Q9UHC9 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC20.52■□□□□ 0.88
NPC1L1Q9UHC9 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
NPC1L1Q9UHC9 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC20.52■□□□□ 0.88
NPC1L1Q9UHC9 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
NPC1L1Q9UHC9 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC20.52■□□□□ 0.88
NPC1L1Q9UHC9 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
NPC1L1Q9UHC9 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC20.52■□□□□ 0.88
NPC1L1Q9UHC9 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
NPC1L1Q9UHC9 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC20.52■□□□□ 0.88
NPC1L1Q9UHC9 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
NPC1L1Q9UHC9 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
NPC1L1Q9UHC9 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
NPC1L1Q9UHC9 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC20.52■□□□□ 0.88
NPC1L1Q9UHC9 NOP2-220ENST00000545915 630 ntTSL 2 BASIC20.52■□□□□ 0.88
NPC1L1Q9UHC9 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
NPC1L1Q9UHC9 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC20.52■□□□□ 0.88
NPC1L1Q9UHC9 AC008687.7-202ENST00000637404 953 ntBASIC20.52■□□□□ 0.88
NPC1L1Q9UHC9 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
NPC1L1Q9UHC9 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
NPC1L1Q9UHC9 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
NPC1L1Q9UHC9 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
NPC1L1Q9UHC9 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC20.52■□□□□ 0.88
NPC1L1Q9UHC9 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
NPC1L1Q9UHC9 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC20.52■□□□□ 0.88
NPC1L1Q9UHC9 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC20.52■□□□□ 0.88
NPC1L1Q9UHC9 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC20.52■□□□□ 0.87
NPC1L1Q9UHC9 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC20.52■□□□□ 0.87
NPC1L1Q9UHC9 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
NPC1L1Q9UHC9 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC20.51■□□□□ 0.87
NPC1L1Q9UHC9 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
NPC1L1Q9UHC9 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
NPC1L1Q9UHC9 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC20.51■□□□□ 0.87
NPC1L1Q9UHC9 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
NPC1L1Q9UHC9 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
NPC1L1Q9UHC9 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
NPC1L1Q9UHC9 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
NPC1L1Q9UHC9 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
NPC1L1Q9UHC9 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC20.51■□□□□ 0.87
NPC1L1Q9UHC9 AC003102.2-201ENST00000589195 1469 ntBASIC20.51■□□□□ 0.87
NPC1L1Q9UHC9 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
NPC1L1Q9UHC9 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
NPC1L1Q9UHC9 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
NPC1L1Q9UHC9 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
NPC1L1Q9UHC9 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC20.51■□□□□ 0.87
NPC1L1Q9UHC9 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC20.51■□□□□ 0.87
NPC1L1Q9UHC9 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
NPC1L1Q9UHC9 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
NPC1L1Q9UHC9 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC20.51■□□□□ 0.87
NPC1L1Q9UHC9 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC20.51■□□□□ 0.87
NPC1L1Q9UHC9 RPS24-214ENST00000613865 538 ntTSL 5 BASIC20.51■□□□□ 0.87
NPC1L1Q9UHC9 MIR6775-201ENST00000617557 69 ntBASIC20.51■□□□□ 0.87
NPC1L1Q9UHC9 AC138951.2-201ENST00000623455 1161 ntBASIC20.51■□□□□ 0.87
NPC1L1Q9UHC9 GSN-215ENST00000545652 2428 ntTSL 2 BASIC20.51■□□□□ 0.87
NPC1L1Q9UHC9 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC20.51■□□□□ 0.87
NPC1L1Q9UHC9 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
NPC1L1Q9UHC9 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
NPC1L1Q9UHC9 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
NPC1L1Q9UHC9 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC20.51■□□□□ 0.87
NPC1L1Q9UHC9 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
NPC1L1Q9UHC9 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
NPC1L1Q9UHC9 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
NPC1L1Q9UHC9 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
NPC1L1Q9UHC9 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
NPC1L1Q9UHC9 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
NPC1L1Q9UHC9 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
NPC1L1Q9UHC9 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC20.51■□□□□ 0.87
NPC1L1Q9UHC9 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
NPC1L1Q9UHC9 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
NPC1L1Q9UHC9 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
NPC1L1Q9UHC9 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
NPC1L1Q9UHC9 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
NPC1L1Q9UHC9 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC20.5■□□□□ 0.87
NPC1L1Q9UHC9 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC20.5■□□□□ 0.87
NPC1L1Q9UHC9 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
NPC1L1Q9UHC9 CTBP2P5-201ENST00000454986 1264 ntBASIC20.5■□□□□ 0.87
NPC1L1Q9UHC9 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
NPC1L1Q9UHC9 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC20.5■□□□□ 0.87
NPC1L1Q9UHC9 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
NPC1L1Q9UHC9 AC104989.1-201ENST00000519711 778 ntBASIC20.5■□□□□ 0.87
NPC1L1Q9UHC9 IGHV3-71-201ENST00000523324 359 ntBASIC20.5■□□□□ 0.87
NPC1L1Q9UHC9 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC20.5■□□□□ 0.87
NPC1L1Q9UHC9 AP005482.1-201ENST00000563722 1273 ntBASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms