Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CLIP2Q9UDT6 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CLIP2Q9UDT6 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CLIP2Q9UDT6 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
CLIP2Q9UDT6 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CLIP2Q9UDT6 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CLIP2Q9UDT6 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLIP2Q9UDT6 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLIP2Q9UDT6 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLIP2Q9UDT6 AC007389.4-201ENST00000454674 793 ntBASIC18.37■□□□□ 0.53
CLIP2Q9UDT6 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC18.37■□□□□ 0.53
CLIP2Q9UDT6 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC18.37■□□□□ 0.53
CLIP2Q9UDT6 NOP2-220ENST00000545915 630 ntTSL 2 BASIC18.37■□□□□ 0.53
CLIP2Q9UDT6 GPX4-206ENST00000588919 803 ntTSL 2 BASIC18.37■□□□□ 0.53
CLIP2Q9UDT6 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLIP2Q9UDT6 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC18.37■□□□□ 0.53
CLIP2Q9UDT6 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC18.37■□□□□ 0.53
CLIP2Q9UDT6 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
CLIP2Q9UDT6 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLIP2Q9UDT6 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CLIP2Q9UDT6 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC18.37■□□□□ 0.53
CLIP2Q9UDT6 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC18.37■□□□□ 0.53
CLIP2Q9UDT6 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
CLIP2Q9UDT6 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC18.37■□□□□ 0.53
CLIP2Q9UDT6 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC18.37■□□□□ 0.53
CLIP2Q9UDT6 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLIP2Q9UDT6 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
CLIP2Q9UDT6 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLIP2Q9UDT6 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC18.37■□□□□ 0.53
CLIP2Q9UDT6 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CLIP2Q9UDT6 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
CLIP2Q9UDT6 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CLIP2Q9UDT6 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLIP2Q9UDT6 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLIP2Q9UDT6 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLIP2Q9UDT6 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLIP2Q9UDT6 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
CLIP2Q9UDT6 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC18.36■□□□□ 0.53
CLIP2Q9UDT6 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLIP2Q9UDT6 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CLIP2Q9UDT6 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLIP2Q9UDT6 AC134915.1-201ENST00000426461 574 ntBASIC18.36■□□□□ 0.53
CLIP2Q9UDT6 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC18.36■□□□□ 0.53
CLIP2Q9UDT6 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CLIP2Q9UDT6 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CLIP2Q9UDT6 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLIP2Q9UDT6 KRT18P43-201ENST00000469825 1281 ntBASIC18.36■□□□□ 0.53
CLIP2Q9UDT6 HILS1-202ENST00000545329 423 ntBASIC18.36■□□□□ 0.53
CLIP2Q9UDT6 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC18.36■□□□□ 0.53
CLIP2Q9UDT6 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC18.36■□□□□ 0.53
CLIP2Q9UDT6 AC010319.3-201ENST00000597028 470 ntBASIC18.36■□□□□ 0.53
CLIP2Q9UDT6 AL049840.4-201ENST00000602422 811 ntBASIC18.36■□□□□ 0.53
CLIP2Q9UDT6 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC18.36■□□□□ 0.53
CLIP2Q9UDT6 TP73-209ENST00000603362 1668 ntTSL 5 BASIC18.36■□□□□ 0.53
CLIP2Q9UDT6 AL008721.1-201ENST00000609964 604 ntBASIC18.36■□□□□ 0.53
CLIP2Q9UDT6 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLIP2Q9UDT6 AL162274.1-201ENST00000617191 1098 ntBASIC18.36■□□□□ 0.53
CLIP2Q9UDT6 RPSAP52-203ENST00000622976 1023 ntBASIC18.36■□□□□ 0.53
CLIP2Q9UDT6 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLIP2Q9UDT6 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
CLIP2Q9UDT6 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CLIP2Q9UDT6 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLIP2Q9UDT6 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLIP2Q9UDT6 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
CLIP2Q9UDT6 AC023157.3-201ENST00000619086 2088 ntBASIC18.35■□□□□ 0.53
CLIP2Q9UDT6 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLIP2Q9UDT6 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CLIP2Q9UDT6 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLIP2Q9UDT6 TK1-203ENST00000588734 1681 ntTSL 2 BASIC18.35■□□□□ 0.53
CLIP2Q9UDT6 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLIP2Q9UDT6 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC18.35■□□□□ 0.53
CLIP2Q9UDT6 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC18.35■□□□□ 0.53
CLIP2Q9UDT6 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
CLIP2Q9UDT6 CYP2AB1P-202ENST00000454440 1456 ntBASIC18.35■□□□□ 0.53
CLIP2Q9UDT6 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLIP2Q9UDT6 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
CLIP2Q9UDT6 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC18.35■□□□□ 0.53
CLIP2Q9UDT6 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
CLIP2Q9UDT6 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CLIP2Q9UDT6 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLIP2Q9UDT6 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
CLIP2Q9UDT6 ARSEP1-201ENST00000420443 635 ntBASIC18.35■□□□□ 0.53
CLIP2Q9UDT6 AC112492.5-201ENST00000421897 457 ntBASIC18.35■□□□□ 0.53
CLIP2Q9UDT6 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CLIP2Q9UDT6 GPR53P-205ENST00000457298 1084 ntBASIC18.35■□□□□ 0.53
CLIP2Q9UDT6 VDAC1P7-201ENST00000462417 847 ntBASIC18.35■□□□□ 0.53
CLIP2Q9UDT6 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC18.35■□□□□ 0.53
CLIP2Q9UDT6 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC18.35■□□□□ 0.53
CLIP2Q9UDT6 AC000095.1-201ENST00000603208 874 ntBASIC18.35■□□□□ 0.53
CLIP2Q9UDT6 CU634019.7-201ENST00000624153 1185 ntBASIC18.35■□□□□ 0.53
CLIP2Q9UDT6 FP236241.2-201ENST00000624906 1185 ntBASIC18.35■□□□□ 0.53
CLIP2Q9UDT6 ABBA01031660.1-201ENST00000635219 756 ntBASIC18.35■□□□□ 0.53
CLIP2Q9UDT6 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC18.35■□□□□ 0.53
CLIP2Q9UDT6 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC18.35■□□□□ 0.53
CLIP2Q9UDT6 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLIP2Q9UDT6 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
CLIP2Q9UDT6 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLIP2Q9UDT6 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLIP2Q9UDT6 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLIP2Q9UDT6 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms