Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC17.52■□□□□ 0.4
HDAC6Q9UBN7 AC068587.3-201ENST00000526613 355 ntBASIC17.52■□□□□ 0.4
HDAC6Q9UBN7 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HDAC6Q9UBN7 APRT-204ENST00000563655 709 ntTSL 5 BASIC17.52■□□□□ 0.4
HDAC6Q9UBN7 AC120045.2-201ENST00000567334 178 ntBASIC17.52■□□□□ 0.4
HDAC6Q9UBN7 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC17.52■□□□□ 0.4
HDAC6Q9UBN7 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
HDAC6Q9UBN7 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HDAC6Q9UBN7 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC17.52■□□□□ 0.4
HDAC6Q9UBN7 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
HDAC6Q9UBN7 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
HDAC6Q9UBN7 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
HDAC6Q9UBN7 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
HDAC6Q9UBN7 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
HDAC6Q9UBN7 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC17.52■□□□□ 0.39
HDAC6Q9UBN7 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC17.52■□□□□ 0.39
HDAC6Q9UBN7 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.39
HDAC6Q9UBN7 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
HDAC6Q9UBN7 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
HDAC6Q9UBN7 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC17.52■□□□□ 0.39
HDAC6Q9UBN7 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC17.52■□□□□ 0.39
HDAC6Q9UBN7 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC17.52■□□□□ 0.39
HDAC6Q9UBN7 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC17.52■□□□□ 0.39
HDAC6Q9UBN7 AC136621.1-201ENST00000624017 2304 ntBASIC17.52■□□□□ 0.39
HDAC6Q9UBN7 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
HDAC6Q9UBN7 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
HDAC6Q9UBN7 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HDAC6Q9UBN7 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC17.51■□□□□ 0.39
HDAC6Q9UBN7 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HDAC6Q9UBN7 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
HDAC6Q9UBN7 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HDAC6Q9UBN7 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC17.51■□□□□ 0.39
HDAC6Q9UBN7 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC17.51■□□□□ 0.39
HDAC6Q9UBN7 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
HDAC6Q9UBN7 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC17.51■□□□□ 0.39
HDAC6Q9UBN7 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC17.51■□□□□ 0.39
HDAC6Q9UBN7 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC17.51■□□□□ 0.39
HDAC6Q9UBN7 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
HDAC6Q9UBN7 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HDAC6Q9UBN7 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
HDAC6Q9UBN7 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
HDAC6Q9UBN7 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HDAC6Q9UBN7 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
HDAC6Q9UBN7 C1QBPP1-201ENST00000400117 770 ntBASIC17.51■□□□□ 0.39
HDAC6Q9UBN7 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
HDAC6Q9UBN7 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
HDAC6Q9UBN7 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC17.51■□□□□ 0.39
HDAC6Q9UBN7 RPL13AP25-201ENST00000484130 612 ntBASIC17.51■□□□□ 0.39
HDAC6Q9UBN7 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC17.51■□□□□ 0.39
HDAC6Q9UBN7 PACS1-203ENST00000524815 628 ntTSL 4 BASIC17.51■□□□□ 0.39
HDAC6Q9UBN7 AP001889.1-201ENST00000525414 633 ntBASIC17.51■□□□□ 0.39
HDAC6Q9UBN7 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
HDAC6Q9UBN7 PTP4A1P2-201ENST00000546033 454 ntBASIC17.51■□□□□ 0.39
HDAC6Q9UBN7 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC17.51■□□□□ 0.39
HDAC6Q9UBN7 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
HDAC6Q9UBN7 MIR4538-201ENST00000581377 78 ntBASIC17.51■□□□□ 0.39
HDAC6Q9UBN7 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC17.51■□□□□ 0.39
HDAC6Q9UBN7 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC17.51■□□□□ 0.39
HDAC6Q9UBN7 AC097359.3-201ENST00000603982 1210 ntBASIC17.51■□□□□ 0.39
HDAC6Q9UBN7 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC17.51■□□□□ 0.39
HDAC6Q9UBN7 AL607033.1-201ENST00000623900 1599 ntBASIC17.51■□□□□ 0.39
HDAC6Q9UBN7 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
HDAC6Q9UBN7 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HDAC6Q9UBN7 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
HDAC6Q9UBN7 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
HDAC6Q9UBN7 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
HDAC6Q9UBN7 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
HDAC6Q9UBN7 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC17.51■□□□□ 0.39
HDAC6Q9UBN7 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
HDAC6Q9UBN7 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC17.51■□□□□ 0.39
HDAC6Q9UBN7 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
HDAC6Q9UBN7 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HDAC6Q9UBN7 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
HDAC6Q9UBN7 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
HDAC6Q9UBN7 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
HDAC6Q9UBN7 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC17.5■□□□□ 0.39
HDAC6Q9UBN7 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HDAC6Q9UBN7 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC17.5■□□□□ 0.39
HDAC6Q9UBN7 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HDAC6Q9UBN7 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HDAC6Q9UBN7 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HDAC6Q9UBN7 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HDAC6Q9UBN7 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HDAC6Q9UBN7 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HDAC6Q9UBN7 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HDAC6Q9UBN7 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HDAC6Q9UBN7 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
HDAC6Q9UBN7 TPO-203ENST00000346956 2923 ntTSL 5 BASIC17.5■□□□□ 0.39
HDAC6Q9UBN7 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HDAC6Q9UBN7 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC17.5■□□□□ 0.39
HDAC6Q9UBN7 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HDAC6Q9UBN7 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
HDAC6Q9UBN7 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
HDAC6Q9UBN7 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HDAC6Q9UBN7 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
HDAC6Q9UBN7 AC005229.1-201ENST00000392885 409 ntBASIC17.5■□□□□ 0.39
HDAC6Q9UBN7 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC17.5■□□□□ 0.39
HDAC6Q9UBN7 AC099336.1-201ENST00000417053 1171 ntBASIC17.5■□□□□ 0.39
HDAC6Q9UBN7 USB1-202ENST00000423271 1217 ntTSL 2 BASIC17.5■□□□□ 0.39
HDAC6Q9UBN7 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms