Protein–RNA interactions for Protein: Q9NRR5

UBQLN4, Ubiquilin-4, humanhuman

Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4Q9NRR5 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
UBQLN4Q9NRR5 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
UBQLN4Q9NRR5 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
UBQLN4Q9NRR5 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
UBQLN4Q9NRR5 SUN1-204ENST00000403868 978 ntTSL 2 BASIC14.25□□□□□ -0.13
UBQLN4Q9NRR5 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
UBQLN4Q9NRR5 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC14.25□□□□□ -0.13
UBQLN4Q9NRR5 BCRP1-201ENST00000444246 691 ntBASIC14.25□□□□□ -0.13
UBQLN4Q9NRR5 GNAQP1-201ENST00000444815 1067 ntBASIC14.25□□□□□ -0.13
UBQLN4Q9NRR5 SPTLC1P1-201ENST00000447199 261 ntBASIC14.25□□□□□ -0.13
UBQLN4Q9NRR5 RN7SL399P-201ENST00000471648 279 ntBASIC14.25□□□□□ -0.13
UBQLN4Q9NRR5 FAM86LP-201ENST00000478302 853 ntBASIC14.25□□□□□ -0.13
UBQLN4Q9NRR5 CD81-207ENST00000481687 890 ntTSL 2 BASIC14.25□□□□□ -0.13
UBQLN4Q9NRR5 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC14.25□□□□□ -0.13
UBQLN4Q9NRR5 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
UBQLN4Q9NRR5 AC055876.2-201ENST00000531834 546 ntBASIC14.25□□□□□ -0.13
UBQLN4Q9NRR5 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC14.25□□□□□ -0.13
UBQLN4Q9NRR5 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
UBQLN4Q9NRR5 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC14.25□□□□□ -0.13
UBQLN4Q9NRR5 AL355385.1-201ENST00000606123 409 ntBASIC14.25□□□□□ -0.13
UBQLN4Q9NRR5 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
UBQLN4Q9NRR5 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
UBQLN4Q9NRR5 AC004790.1-201ENST00000612686 536 ntBASIC14.25□□□□□ -0.13
UBQLN4Q9NRR5 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
UBQLN4Q9NRR5 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
UBQLN4Q9NRR5 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
UBQLN4Q9NRR5 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
UBQLN4Q9NRR5 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
UBQLN4Q9NRR5 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
UBQLN4Q9NRR5 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
UBQLN4Q9NRR5 AC126755.1-201ENST00000525846 6405 ntBASIC14.25□□□□□ -0.13
UBQLN4Q9NRR5 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
UBQLN4Q9NRR5 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
UBQLN4Q9NRR5 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
UBQLN4Q9NRR5 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
UBQLN4Q9NRR5 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
UBQLN4Q9NRR5 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
UBQLN4Q9NRR5 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
UBQLN4Q9NRR5 AC144831.1-201ENST00000573312 2656 ntBASIC14.25□□□□□ -0.13
UBQLN4Q9NRR5 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
UBQLN4Q9NRR5 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC14.25□□□□□ -0.13
UBQLN4Q9NRR5 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
UBQLN4Q9NRR5 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
UBQLN4Q9NRR5 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC14.25□□□□□ -0.13
UBQLN4Q9NRR5 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
UBQLN4Q9NRR5 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
UBQLN4Q9NRR5 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC14.25□□□□□ -0.13
UBQLN4Q9NRR5 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
UBQLN4Q9NRR5 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
UBQLN4Q9NRR5 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC14.24□□□□□ -0.13
UBQLN4Q9NRR5 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
UBQLN4Q9NRR5 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
UBQLN4Q9NRR5 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
UBQLN4Q9NRR5 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC14.24□□□□□ -0.13
UBQLN4Q9NRR5 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
UBQLN4Q9NRR5 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC14.24□□□□□ -0.13
UBQLN4Q9NRR5 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
UBQLN4Q9NRR5 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
UBQLN4Q9NRR5 AC006058.4-201ENST00000624016 1670 ntBASIC14.24□□□□□ -0.13
UBQLN4Q9NRR5 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
UBQLN4Q9NRR5 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
UBQLN4Q9NRR5 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
UBQLN4Q9NRR5 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
UBQLN4Q9NRR5 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
UBQLN4Q9NRR5 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
UBQLN4Q9NRR5 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
UBQLN4Q9NRR5 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
UBQLN4Q9NRR5 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC14.24□□□□□ -0.13
UBQLN4Q9NRR5 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
UBQLN4Q9NRR5 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
UBQLN4Q9NRR5 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
UBQLN4Q9NRR5 GHSR-202ENST00000427970 912 ntBASIC14.24□□□□□ -0.13
UBQLN4Q9NRR5 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC14.24□□□□□ -0.13
UBQLN4Q9NRR5 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC14.24□□□□□ -0.13
UBQLN4Q9NRR5 RPL13AP25-201ENST00000484130 612 ntBASIC14.24□□□□□ -0.13
UBQLN4Q9NRR5 SERBP1P5-201ENST00000510079 1181 ntBASIC14.24□□□□□ -0.13
UBQLN4Q9NRR5 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
UBQLN4Q9NRR5 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC14.24□□□□□ -0.13
UBQLN4Q9NRR5 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC14.24□□□□□ -0.13
UBQLN4Q9NRR5 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC14.24□□□□□ -0.13
UBQLN4Q9NRR5 GPX4-206ENST00000588919 803 ntTSL 2 BASIC14.24□□□□□ -0.13
UBQLN4Q9NRR5 AC099568.2-201ENST00000609194 695 ntBASIC14.24□□□□□ -0.13
UBQLN4Q9NRR5 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC14.24□□□□□ -0.13
UBQLN4Q9NRR5 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
UBQLN4Q9NRR5 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
UBQLN4Q9NRR5 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
UBQLN4Q9NRR5 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
UBQLN4Q9NRR5 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
UBQLN4Q9NRR5 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
UBQLN4Q9NRR5 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
UBQLN4Q9NRR5 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
UBQLN4Q9NRR5 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
UBQLN4Q9NRR5 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC14.24□□□□□ -0.13
UBQLN4Q9NRR5 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
UBQLN4Q9NRR5 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
UBQLN4Q9NRR5 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
UBQLN4Q9NRR5 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC14.24□□□□□ -0.13
UBQLN4Q9NRR5 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
UBQLN4Q9NRR5 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
UBQLN4Q9NRR5 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms