Protein–RNA interactions for Protein: Q9H611

PIF1, ATP-dependent DNA helicase PIF1, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1Q9H611 AL645939.2-201ENST00000427340 991 ntBASIC14.89□□□□□ -0.03
PIF1Q9H611 PHKG1P2-201ENST00000457537 863 ntBASIC14.89□□□□□ -0.03
PIF1Q9H611 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
PIF1Q9H611 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC14.89□□□□□ -0.03
PIF1Q9H611 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC14.89□□□□□ -0.03
PIF1Q9H611 COX5A-206ENST00000568783 571 ntTSL 3 BASIC14.89□□□□□ -0.03
PIF1Q9H611 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
PIF1Q9H611 AC027307.2-201ENST00000591252 911 ntBASIC14.89□□□□□ -0.03
PIF1Q9H611 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
PIF1Q9H611 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
PIF1Q9H611 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
PIF1Q9H611 CICP11-201ENST00000434745 2827 ntBASIC14.89□□□□□ -0.03
PIF1Q9H611 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PIF1Q9H611 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC14.89□□□□□ -0.03
PIF1Q9H611 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PIF1Q9H611 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
PIF1Q9H611 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
PIF1Q9H611 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC14.89□□□□□ -0.03
PIF1Q9H611 CICP14-201ENST00000629111 2732 ntBASIC14.89□□□□□ -0.03
PIF1Q9H611 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
PIF1Q9H611 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC14.89□□□□□ -0.03
PIF1Q9H611 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PIF1Q9H611 PPP1R26P4-201ENST00000619065 3527 ntBASIC14.89□□□□□ -0.03
PIF1Q9H611 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PIF1Q9H611 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PIF1Q9H611 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC14.89□□□□□ -0.03
PIF1Q9H611 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PIF1Q9H611 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PIF1Q9H611 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PIF1Q9H611 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PIF1Q9H611 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PIF1Q9H611 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC14.89□□□□□ -0.03
PIF1Q9H611 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC14.89□□□□□ -0.03
PIF1Q9H611 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PIF1Q9H611 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PIF1Q9H611 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
PIF1Q9H611 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
PIF1Q9H611 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PIF1Q9H611 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
PIF1Q9H611 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
PIF1Q9H611 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
PIF1Q9H611 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
PIF1Q9H611 ZBED1P1-201ENST00000502364 1930 ntBASIC14.88□□□□□ -0.03
PIF1Q9H611 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC14.88□□□□□ -0.03
PIF1Q9H611 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
PIF1Q9H611 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PIF1Q9H611 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
PIF1Q9H611 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PIF1Q9H611 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
PIF1Q9H611 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PIF1Q9H611 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
PIF1Q9H611 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
PIF1Q9H611 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PIF1Q9H611 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC14.88□□□□□ -0.03
PIF1Q9H611 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
PIF1Q9H611 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC14.88□□□□□ -0.03
PIF1Q9H611 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC14.88□□□□□ -0.03
PIF1Q9H611 RPS8P6-201ENST00000426177 609 ntBASIC14.88□□□□□ -0.03
PIF1Q9H611 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC14.88□□□□□ -0.03
PIF1Q9H611 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC14.88□□□□□ -0.03
PIF1Q9H611 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC14.88□□□□□ -0.03
PIF1Q9H611 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC14.88□□□□□ -0.03
PIF1Q9H611 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC14.88□□□□□ -0.03
PIF1Q9H611 RARRES2P8-201ENST00000566335 367 ntBASIC14.88□□□□□ -0.03
PIF1Q9H611 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
PIF1Q9H611 COQ9-214ENST00000567933 882 ntTSL 3 BASIC14.88□□□□□ -0.03
PIF1Q9H611 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC14.88□□□□□ -0.03
PIF1Q9H611 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC14.88□□□□□ -0.03
PIF1Q9H611 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
PIF1Q9H611 KRT8P37-201ENST00000451609 1420 ntBASIC14.88□□□□□ -0.03
PIF1Q9H611 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
PIF1Q9H611 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
PIF1Q9H611 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
PIF1Q9H611 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC14.88□□□□□ -0.03
PIF1Q9H611 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PIF1Q9H611 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
PIF1Q9H611 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
PIF1Q9H611 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PIF1Q9H611 AC067750.1-201ENST00000608826 6545 ntBASIC14.88□□□□□ -0.03
PIF1Q9H611 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC14.88□□□□□ -0.03
PIF1Q9H611 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC14.88□□□□□ -0.03
PIF1Q9H611 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PIF1Q9H611 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
PIF1Q9H611 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC14.88□□□□□ -0.03
PIF1Q9H611 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
PIF1Q9H611 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
PIF1Q9H611 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC14.88□□□□□ -0.03
PIF1Q9H611 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
PIF1Q9H611 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PIF1Q9H611 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PIF1Q9H611 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PIF1Q9H611 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
PIF1Q9H611 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PIF1Q9H611 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
PIF1Q9H611 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
PIF1Q9H611 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
PIF1Q9H611 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
PIF1Q9H611 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC14.87□□□□□ -0.03
PIF1Q9H611 AC005840.4-201ENST00000541242 2494 ntBASIC14.87□□□□□ -0.03
PIF1Q9H611 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms