Protein–RNA interactions for Protein: Q96GD3

SCMH1, Polycomb protein SCMH1, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCMH1Q96GD3 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SCMH1Q96GD3 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC14.36□□□□□ -0.11
SCMH1Q96GD3 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SCMH1Q96GD3 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SCMH1Q96GD3 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SCMH1Q96GD3 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
SCMH1Q96GD3 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC14.36□□□□□ -0.11
SCMH1Q96GD3 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SCMH1Q96GD3 LCK-206ENST00000373564 2137 ntTSL 5 BASIC14.36□□□□□ -0.11
SCMH1Q96GD3 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC14.36□□□□□ -0.11
SCMH1Q96GD3 AC026748.1-201ENST00000624349 3251 ntBASIC14.36□□□□□ -0.11
SCMH1Q96GD3 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
SCMH1Q96GD3 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SCMH1Q96GD3 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SCMH1Q96GD3 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SCMH1Q96GD3 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
SCMH1Q96GD3 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC14.36□□□□□ -0.11
SCMH1Q96GD3 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SCMH1Q96GD3 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC14.35□□□□□ -0.11
SCMH1Q96GD3 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SCMH1Q96GD3 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SCMH1Q96GD3 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC14.35□□□□□ -0.11
SCMH1Q96GD3 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SCMH1Q96GD3 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC14.35□□□□□ -0.11
SCMH1Q96GD3 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC14.35□□□□□ -0.11
SCMH1Q96GD3 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
SCMH1Q96GD3 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
SCMH1Q96GD3 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SCMH1Q96GD3 NFIC-211ENST00000641145 8399 ntBASIC14.35□□□□□ -0.11
SCMH1Q96GD3 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SCMH1Q96GD3 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SCMH1Q96GD3 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC14.35□□□□□ -0.11
SCMH1Q96GD3 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
SCMH1Q96GD3 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC14.35□□□□□ -0.11
SCMH1Q96GD3 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SCMH1Q96GD3 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SCMH1Q96GD3 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SCMH1Q96GD3 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC14.35□□□□□ -0.11
SCMH1Q96GD3 APOA1-205ENST00000375329 927 ntTSL 2 BASIC14.35□□□□□ -0.11
SCMH1Q96GD3 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
SCMH1Q96GD3 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SCMH1Q96GD3 BOLA2P3-201ENST00000404566 256 ntBASIC14.35□□□□□ -0.11
SCMH1Q96GD3 AC134915.1-201ENST00000426461 574 ntBASIC14.35□□□□□ -0.11
SCMH1Q96GD3 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC14.35□□□□□ -0.11
SCMH1Q96GD3 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
SCMH1Q96GD3 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC14.35□□□□□ -0.11
SCMH1Q96GD3 ENPP7P5-201ENST00000541031 1031 ntBASIC14.35□□□□□ -0.11
SCMH1Q96GD3 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC14.35□□□□□ -0.11
SCMH1Q96GD3 CMC2-214ENST00000565925 640 ntTSL 5 BASIC14.35□□□□□ -0.11
SCMH1Q96GD3 MIR5189-201ENST00000577370 114 ntBASIC14.35□□□□□ -0.11
SCMH1Q96GD3 AL049840.4-201ENST00000602422 811 ntBASIC14.35□□□□□ -0.11
SCMH1Q96GD3 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC14.35□□□□□ -0.11
SCMH1Q96GD3 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC14.35□□□□□ -0.11
SCMH1Q96GD3 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC14.35□□□□□ -0.11
SCMH1Q96GD3 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
SCMH1Q96GD3 SP100-205ENST00000409824 1802 ntTSL 5 BASIC14.35□□□□□ -0.11
SCMH1Q96GD3 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC14.35□□□□□ -0.11
SCMH1Q96GD3 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SCMH1Q96GD3 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC14.35□□□□□ -0.11
SCMH1Q96GD3 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC14.35□□□□□ -0.11
SCMH1Q96GD3 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC14.35□□□□□ -0.11
SCMH1Q96GD3 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SCMH1Q96GD3 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
SCMH1Q96GD3 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC14.35□□□□□ -0.11
SCMH1Q96GD3 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
SCMH1Q96GD3 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SCMH1Q96GD3 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC14.35□□□□□ -0.11
SCMH1Q96GD3 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC14.35□□□□□ -0.11
SCMH1Q96GD3 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
SCMH1Q96GD3 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SCMH1Q96GD3 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
SCMH1Q96GD3 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC14.35□□□□□ -0.11
SCMH1Q96GD3 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SCMH1Q96GD3 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SCMH1Q96GD3 AC104581.4-201ENST00000623126 3052 ntBASIC14.35□□□□□ -0.11
SCMH1Q96GD3 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SCMH1Q96GD3 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
SCMH1Q96GD3 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC14.34□□□□□ -0.11
SCMH1Q96GD3 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC14.34□□□□□ -0.11
SCMH1Q96GD3 AC006486.2-201ENST00000624246 2199 ntBASIC14.34□□□□□ -0.11
SCMH1Q96GD3 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
SCMH1Q96GD3 CICP4-201ENST00000447359 2812 ntBASIC14.34□□□□□ -0.11
SCMH1Q96GD3 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SCMH1Q96GD3 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SCMH1Q96GD3 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
SCMH1Q96GD3 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
SCMH1Q96GD3 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC14.34□□□□□ -0.11
SCMH1Q96GD3 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC14.34□□□□□ -0.11
SCMH1Q96GD3 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC14.34□□□□□ -0.11
SCMH1Q96GD3 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SCMH1Q96GD3 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SCMH1Q96GD3 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SCMH1Q96GD3 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SCMH1Q96GD3 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SCMH1Q96GD3 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
SCMH1Q96GD3 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC14.34□□□□□ -0.11
SCMH1Q96GD3 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC14.34□□□□□ -0.11
SCMH1Q96GD3 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC14.34□□□□□ -0.11
SCMH1Q96GD3 KRT18P43-201ENST00000469825 1281 ntBASIC14.34□□□□□ -0.11
SCMH1Q96GD3 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms