Protein–RNA interactions for Protein: Q96DM1

PGBD4, PiggyBac transposable element-derived protein 4, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD4Q96DM1 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC16.75■□□□□ 0.27
PGBD4Q96DM1 AL603832.2-201ENST00000566195 2125 ntBASIC16.75■□□□□ 0.27
PGBD4Q96DM1 AC024909.3-201ENST00000611513 2257 ntBASIC16.75■□□□□ 0.27
PGBD4Q96DM1 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
PGBD4Q96DM1 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
PGBD4Q96DM1 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PGBD4Q96DM1 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PGBD4Q96DM1 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PGBD4Q96DM1 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PGBD4Q96DM1 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PGBD4Q96DM1 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PGBD4Q96DM1 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PGBD4Q96DM1 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC16.74■□□□□ 0.27
PGBD4Q96DM1 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC16.74■□□□□ 0.27
PGBD4Q96DM1 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
PGBD4Q96DM1 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PGBD4Q96DM1 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
PGBD4Q96DM1 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PGBD4Q96DM1 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC16.74■□□□□ 0.27
PGBD4Q96DM1 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC16.74■□□□□ 0.27
PGBD4Q96DM1 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PGBD4Q96DM1 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
PGBD4Q96DM1 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
PGBD4Q96DM1 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC16.74■□□□□ 0.27
PGBD4Q96DM1 AC004066.1-201ENST00000502488 802 ntBASIC16.74■□□□□ 0.27
PGBD4Q96DM1 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
PGBD4Q96DM1 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PGBD4Q96DM1 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC16.74■□□□□ 0.27
PGBD4Q96DM1 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC16.74■□□□□ 0.27
PGBD4Q96DM1 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC16.74■□□□□ 0.27
PGBD4Q96DM1 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC16.74■□□□□ 0.27
PGBD4Q96DM1 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC16.74■□□□□ 0.27
PGBD4Q96DM1 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PGBD4Q96DM1 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
PGBD4Q96DM1 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PGBD4Q96DM1 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
PGBD4Q96DM1 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PGBD4Q96DM1 AL365203.3-201ENST00000609742 2057 ntBASIC16.74■□□□□ 0.27
PGBD4Q96DM1 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PGBD4Q96DM1 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PGBD4Q96DM1 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PGBD4Q96DM1 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
PGBD4Q96DM1 MST1L-201ENST00000442552 2185 ntBASIC16.74■□□□□ 0.27
PGBD4Q96DM1 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PGBD4Q96DM1 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
PGBD4Q96DM1 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
PGBD4Q96DM1 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PGBD4Q96DM1 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PGBD4Q96DM1 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
PGBD4Q96DM1 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC16.73■□□□□ 0.27
PGBD4Q96DM1 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
PGBD4Q96DM1 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PGBD4Q96DM1 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PGBD4Q96DM1 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
PGBD4Q96DM1 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PGBD4Q96DM1 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC16.73■□□□□ 0.27
PGBD4Q96DM1 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PGBD4Q96DM1 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PGBD4Q96DM1 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PGBD4Q96DM1 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PGBD4Q96DM1 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PGBD4Q96DM1 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
PGBD4Q96DM1 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
PGBD4Q96DM1 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
PGBD4Q96DM1 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC16.73■□□□□ 0.27
PGBD4Q96DM1 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC16.73■□□□□ 0.27
PGBD4Q96DM1 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PGBD4Q96DM1 AC026954.1-201ENST00000429771 1293 ntBASIC16.73■□□□□ 0.27
PGBD4Q96DM1 AC022494.1-201ENST00000466044 728 ntBASIC16.73■□□□□ 0.27
PGBD4Q96DM1 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
PGBD4Q96DM1 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC16.73■□□□□ 0.27
PGBD4Q96DM1 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC16.73■□□□□ 0.27
PGBD4Q96DM1 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC16.73■□□□□ 0.27
PGBD4Q96DM1 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
PGBD4Q96DM1 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC16.73■□□□□ 0.27
PGBD4Q96DM1 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
PGBD4Q96DM1 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC16.73■□□□□ 0.27
PGBD4Q96DM1 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
PGBD4Q96DM1 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC16.73■□□□□ 0.27
PGBD4Q96DM1 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
PGBD4Q96DM1 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PGBD4Q96DM1 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
PGBD4Q96DM1 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PGBD4Q96DM1 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PGBD4Q96DM1 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
PGBD4Q96DM1 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC16.72■□□□□ 0.27
PGBD4Q96DM1 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC16.72■□□□□ 0.27
PGBD4Q96DM1 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC16.72■□□□□ 0.27
PGBD4Q96DM1 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC16.72■□□□□ 0.27
PGBD4Q96DM1 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
PGBD4Q96DM1 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
PGBD4Q96DM1 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
PGBD4Q96DM1 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
PGBD4Q96DM1 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PGBD4Q96DM1 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC16.72■□□□□ 0.27
PGBD4Q96DM1 AL645937.2-201ENST00000396808 931 ntBASIC16.72■□□□□ 0.27
PGBD4Q96DM1 ACTBP8-201ENST00000403258 1108 ntBASIC16.72■□□□□ 0.27
PGBD4Q96DM1 MIR1908-201ENST00000410394 80 ntBASIC16.72■□□□□ 0.27
PGBD4Q96DM1 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC16.72■□□□□ 0.27
PGBD4Q96DM1 KLF2P2-201ENST00000416807 1039 ntBASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms