Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
DDX1Q92499 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
DDX1Q92499 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC16.45■□□□□ 0.22
DDX1Q92499 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
DDX1Q92499 SLC9A7P1-202ENST00000556476 2239 ntBASIC16.45■□□□□ 0.22
DDX1Q92499 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
DDX1Q92499 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
DDX1Q92499 CICP23-201ENST00000605013 2741 ntBASIC16.45■□□□□ 0.22
DDX1Q92499 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
DDX1Q92499 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
DDX1Q92499 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
DDX1Q92499 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
DDX1Q92499 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
DDX1Q92499 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC16.45■□□□□ 0.22
DDX1Q92499 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
DDX1Q92499 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC16.45■□□□□ 0.22
DDX1Q92499 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC16.45■□□□□ 0.22
DDX1Q92499 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC16.45■□□□□ 0.22
DDX1Q92499 RNA5-8SN1-201ENST00000610460 153 ntBASIC16.45■□□□□ 0.22
DDX1Q92499 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
DDX1Q92499 RNA5-8SN5-202ENST00000612463 153 ntBASIC16.45■□□□□ 0.22
DDX1Q92499 RNA5-8SN4-201ENST00000613359 153 ntBASIC16.45■□□□□ 0.22
DDX1Q92499 RNA5-8SN5-201ENST00000619471 153 ntBASIC16.45■□□□□ 0.22
DDX1Q92499 IGHV3-72-202ENST00000621503 303 ntBASIC16.45■□□□□ 0.22
DDX1Q92499 GPR39-203ENST00000622084 900 ntTSL 5 BASIC16.45■□□□□ 0.22
DDX1Q92499 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC16.45■□□□□ 0.22
DDX1Q92499 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
DDX1Q92499 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
DDX1Q92499 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
DDX1Q92499 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
DDX1Q92499 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
DDX1Q92499 RER1-203ENST00000378513 3000 ntTSL 3 BASIC16.45■□□□□ 0.22
DDX1Q92499 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
DDX1Q92499 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
DDX1Q92499 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
DDX1Q92499 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC16.44■□□□□ 0.22
DDX1Q92499 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
DDX1Q92499 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
DDX1Q92499 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
DDX1Q92499 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
DDX1Q92499 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
DDX1Q92499 AL359258.3-201ENST00000622910 2331 ntBASIC16.44■□□□□ 0.22
DDX1Q92499 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
DDX1Q92499 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
DDX1Q92499 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
DDX1Q92499 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
DDX1Q92499 AC079776.1-201ENST00000401540 1152 ntBASIC16.44■□□□□ 0.22
DDX1Q92499 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
DDX1Q92499 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC16.44■□□□□ 0.22
DDX1Q92499 API5-211ENST00000534695 560 ntTSL 5 BASIC16.44■□□□□ 0.22
DDX1Q92499 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC16.44■□□□□ 0.22
DDX1Q92499 AC023310.3-201ENST00000557027 670 ntBASIC16.44■□□□□ 0.22
DDX1Q92499 AC100756.1-201ENST00000562736 682 ntBASIC16.44■□□□□ 0.22
DDX1Q92499 AC138749.3-201ENST00000567691 622 ntBASIC16.44■□□□□ 0.22
DDX1Q92499 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC16.44■□□□□ 0.22
DDX1Q92499 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC16.44■□□□□ 0.22
DDX1Q92499 AC116165.1-201ENST00000611806 668 ntBASIC16.44■□□□□ 0.22
DDX1Q92499 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
DDX1Q92499 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
DDX1Q92499 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
DDX1Q92499 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC16.44■□□□□ 0.22
DDX1Q92499 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
DDX1Q92499 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
DDX1Q92499 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC16.44■□□□□ 0.22
DDX1Q92499 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC16.44■□□□□ 0.22
DDX1Q92499 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
DDX1Q92499 AC013726.1-201ENST00000563747 2285 ntBASIC16.44■□□□□ 0.22
DDX1Q92499 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC16.44■□□□□ 0.22
DDX1Q92499 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC16.44■□□□□ 0.22
DDX1Q92499 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC16.44■□□□□ 0.22
DDX1Q92499 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
DDX1Q92499 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC16.44■□□□□ 0.22
DDX1Q92499 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
DDX1Q92499 LINC01101-201ENST00000622953 1884 ntBASIC16.44■□□□□ 0.22
DDX1Q92499 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
DDX1Q92499 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC16.43■□□□□ 0.22
DDX1Q92499 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
DDX1Q92499 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC16.43■□□□□ 0.22
DDX1Q92499 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
DDX1Q92499 AP002414.2-201ENST00000591780 3365 ntBASIC16.43■□□□□ 0.22
DDX1Q92499 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
DDX1Q92499 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
DDX1Q92499 LINC02228-204ENST00000642115 2962 ntBASIC16.43■□□□□ 0.22
DDX1Q92499 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC16.43■□□□□ 0.22
DDX1Q92499 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
DDX1Q92499 RPF1-202ENST00000370656 724 ntTSL 2 BASIC16.43■□□□□ 0.22
DDX1Q92499 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
DDX1Q92499 DFFBP1-201ENST00000433250 979 ntBASIC16.43■□□□□ 0.22
DDX1Q92499 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC16.43■□□□□ 0.22
DDX1Q92499 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC16.43■□□□□ 0.22
DDX1Q92499 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
DDX1Q92499 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
DDX1Q92499 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC16.43■□□□□ 0.22
DDX1Q92499 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC16.43■□□□□ 0.22
DDX1Q92499 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC16.43■□□□□ 0.22
DDX1Q92499 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC16.43■□□□□ 0.22
DDX1Q92499 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
DDX1Q92499 RARRES2P5-201ENST00000564013 466 ntBASIC16.43■□□□□ 0.22
DDX1Q92499 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC16.43■□□□□ 0.22
DDX1Q92499 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms