Protein–RNA interactions for Protein: Q8NE63

HIPK4, Homeodomain-interacting protein kinase 4, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4Q8NE63 AL049840.3-201ENST00000602669 611 ntBASIC15.14■□□□□ 0.01
HIPK4Q8NE63 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC15.14■□□□□ 0.01
HIPK4Q8NE63 AL691432.3-201ENST00000621860 400 ntBASIC15.14■□□□□ 0.01
HIPK4Q8NE63 AC010507.1-201ENST00000633895 436 ntBASIC15.14■□□□□ 0.01
HIPK4Q8NE63 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
HIPK4Q8NE63 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
HIPK4Q8NE63 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HIPK4Q8NE63 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
HIPK4Q8NE63 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
HIPK4Q8NE63 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
HIPK4Q8NE63 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
HIPK4Q8NE63 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HIPK4Q8NE63 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC15.14■□□□□ 0.01
HIPK4Q8NE63 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HIPK4Q8NE63 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC15.14■□□□□ 0.01
HIPK4Q8NE63 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HIPK4Q8NE63 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
HIPK4Q8NE63 AP001282.1-201ENST00000531301 1499 ntBASIC15.14■□□□□ 0.01
HIPK4Q8NE63 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC15.14■□□□□ 0.01
HIPK4Q8NE63 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
HIPK4Q8NE63 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC15.14■□□□□ 0.01
HIPK4Q8NE63 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC15.13■□□□□ 0.01
HIPK4Q8NE63 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HIPK4Q8NE63 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC15.13■□□□□ 0.01
HIPK4Q8NE63 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
HIPK4Q8NE63 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC15.13■□□□□ 0.01
HIPK4Q8NE63 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC15.13■□□□□ 0.01
HIPK4Q8NE63 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC15.13■□□□□ 0.01
HIPK4Q8NE63 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC15.13■□□□□ 0.01
HIPK4Q8NE63 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
HIPK4Q8NE63 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC15.13■□□□□ 0.01
HIPK4Q8NE63 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
HIPK4Q8NE63 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
HIPK4Q8NE63 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
HIPK4Q8NE63 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HIPK4Q8NE63 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HIPK4Q8NE63 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
HIPK4Q8NE63 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC15.13■□□□□ 0.01
HIPK4Q8NE63 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
HIPK4Q8NE63 FALEC-201ENST00000416894 566 ntTSL 3 BASIC15.13■□□□□ 0.01
HIPK4Q8NE63 AC092474.2-201ENST00000424288 719 ntBASIC15.13■□□□□ 0.01
HIPK4Q8NE63 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HIPK4Q8NE63 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
HIPK4Q8NE63 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC15.13■□□□□ 0.01
HIPK4Q8NE63 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
HIPK4Q8NE63 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC15.13■□□□□ 0.01
HIPK4Q8NE63 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC15.13■□□□□ 0.01
HIPK4Q8NE63 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC15.13■□□□□ 0.01
HIPK4Q8NE63 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC15.13■□□□□ 0.01
HIPK4Q8NE63 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC15.13■□□□□ 0.01
HIPK4Q8NE63 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC15.13■□□□□ 0.01
HIPK4Q8NE63 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
HIPK4Q8NE63 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
HIPK4Q8NE63 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC15.13■□□□□ 0.01
HIPK4Q8NE63 AC007064.4-201ENST00000637740 555 ntBASIC15.13■□□□□ 0.01
HIPK4Q8NE63 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HIPK4Q8NE63 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
HIPK4Q8NE63 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HIPK4Q8NE63 AC097359.2-201ENST00000604992 2389 ntBASIC15.13■□□□□ 0.01
HIPK4Q8NE63 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HIPK4Q8NE63 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HIPK4Q8NE63 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HIPK4Q8NE63 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
HIPK4Q8NE63 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HIPK4Q8NE63 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
HIPK4Q8NE63 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HIPK4Q8NE63 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
HIPK4Q8NE63 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HIPK4Q8NE63 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
HIPK4Q8NE63 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC15.12■□□□□ 0.01
HIPK4Q8NE63 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
HIPK4Q8NE63 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HIPK4Q8NE63 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
HIPK4Q8NE63 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
HIPK4Q8NE63 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
HIPK4Q8NE63 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC15.12■□□□□ 0.01
HIPK4Q8NE63 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC15.12■□□□□ 0.01
HIPK4Q8NE63 AC131212.3-201ENST00000624087 4219 ntBASIC15.12■□□□□ 0.01
HIPK4Q8NE63 AL928921.2-201ENST00000641325 2442 ntBASIC15.12■□□□□ 0.01
HIPK4Q8NE63 ZBED1P1-201ENST00000502364 1930 ntBASIC15.12■□□□□ 0.01
HIPK4Q8NE63 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC15.12■□□□□ 0.01
HIPK4Q8NE63 WASH6P-202ENST00000359512 1437 ntBASIC15.12■□□□□ 0.01
HIPK4Q8NE63 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC15.12■□□□□ 0.01
HIPK4Q8NE63 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HIPK4Q8NE63 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HIPK4Q8NE63 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HIPK4Q8NE63 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HIPK4Q8NE63 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
HIPK4Q8NE63 CSF3-203ENST00000394148 622 ntTSL 3 BASIC15.12■□□□□ 0.01
HIPK4Q8NE63 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC15.12■□□□□ 0.01
HIPK4Q8NE63 FAAHP1-202ENST00000446499 1238 ntBASIC15.12■□□□□ 0.01
HIPK4Q8NE63 AC093909.1-201ENST00000504731 1122 ntBASIC15.12■□□□□ 0.01
HIPK4Q8NE63 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC15.12■□□□□ 0.01
HIPK4Q8NE63 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC15.12■□□□□ 0.01
HIPK4Q8NE63 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
HIPK4Q8NE63 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
HIPK4Q8NE63 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
HIPK4Q8NE63 CD7-202ENST00000578509 925 ntTSL 3 BASIC15.12■□□□□ 0.01
HIPK4Q8NE63 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC15.12■□□□□ 0.01
HIPK4Q8NE63 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms