Protein–RNA interactions for Protein: Q8N9L1

ZIC4, Zinc finger protein ZIC 4, humanhuman

Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4Q8N9L1 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ZIC4Q8N9L1 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
ZIC4Q8N9L1 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
ZIC4Q8N9L1 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC13.65□□□□□ -0.22
ZIC4Q8N9L1 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC13.65□□□□□ -0.22
ZIC4Q8N9L1 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ZIC4Q8N9L1 COX20P2-201ENST00000452636 358 ntBASIC13.65□□□□□ -0.22
ZIC4Q8N9L1 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC13.65□□□□□ -0.22
ZIC4Q8N9L1 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC13.65□□□□□ -0.22
ZIC4Q8N9L1 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC13.65□□□□□ -0.22
ZIC4Q8N9L1 IFT20-206ENST00000578122 834 ntTSL 2 BASIC13.65□□□□□ -0.22
ZIC4Q8N9L1 IFT20-208ENST00000578985 831 ntTSL 3 BASIC13.65□□□□□ -0.22
ZIC4Q8N9L1 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
ZIC4Q8N9L1 SRP9-204ENST00000619790 377 ntTSL 2 BASIC13.65□□□□□ -0.22
ZIC4Q8N9L1 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC13.65□□□□□ -0.22
ZIC4Q8N9L1 RPSAP52-203ENST00000622976 1023 ntBASIC13.65□□□□□ -0.22
ZIC4Q8N9L1 AC005252.2-201ENST00000624630 1141 ntBASIC13.65□□□□□ -0.22
ZIC4Q8N9L1 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
ZIC4Q8N9L1 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC13.65□□□□□ -0.22
ZIC4Q8N9L1 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
ZIC4Q8N9L1 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
ZIC4Q8N9L1 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ZIC4Q8N9L1 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ZIC4Q8N9L1 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC13.65□□□□□ -0.22
ZIC4Q8N9L1 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
ZIC4Q8N9L1 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ZIC4Q8N9L1 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
ZIC4Q8N9L1 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ZIC4Q8N9L1 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
ZIC4Q8N9L1 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
ZIC4Q8N9L1 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ZIC4Q8N9L1 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
ZIC4Q8N9L1 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
ZIC4Q8N9L1 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC13.65□□□□□ -0.22
ZIC4Q8N9L1 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
ZIC4Q8N9L1 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
ZIC4Q8N9L1 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ZIC4Q8N9L1 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ZIC4Q8N9L1 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
ZIC4Q8N9L1 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
ZIC4Q8N9L1 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ZIC4Q8N9L1 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ZIC4Q8N9L1 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ZIC4Q8N9L1 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
ZIC4Q8N9L1 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
ZIC4Q8N9L1 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC13.64□□□□□ -0.23
ZIC4Q8N9L1 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC13.64□□□□□ -0.23
ZIC4Q8N9L1 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ZIC4Q8N9L1 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ZIC4Q8N9L1 ZEB1-AS1-208ENST00000607166 2503 ntBASIC13.64□□□□□ -0.23
ZIC4Q8N9L1 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
ZIC4Q8N9L1 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
ZIC4Q8N9L1 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
ZIC4Q8N9L1 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
ZIC4Q8N9L1 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
ZIC4Q8N9L1 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
ZIC4Q8N9L1 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC13.64□□□□□ -0.23
ZIC4Q8N9L1 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
ZIC4Q8N9L1 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
ZIC4Q8N9L1 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
ZIC4Q8N9L1 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ZIC4Q8N9L1 AC012508.2-201ENST00000567613 1472 ntBASIC13.64□□□□□ -0.23
ZIC4Q8N9L1 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
ZIC4Q8N9L1 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ZIC4Q8N9L1 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC13.64□□□□□ -0.23
ZIC4Q8N9L1 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
ZIC4Q8N9L1 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ZIC4Q8N9L1 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ZIC4Q8N9L1 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
ZIC4Q8N9L1 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC13.64□□□□□ -0.23
ZIC4Q8N9L1 AC098614.1-201ENST00000368528 745 ntBASIC13.64□□□□□ -0.23
ZIC4Q8N9L1 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ZIC4Q8N9L1 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
ZIC4Q8N9L1 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
ZIC4Q8N9L1 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC13.64□□□□□ -0.23
ZIC4Q8N9L1 RN7SL692P-201ENST00000464677 288 ntBASIC13.64□□□□□ -0.23
ZIC4Q8N9L1 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ZIC4Q8N9L1 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
ZIC4Q8N9L1 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
ZIC4Q8N9L1 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC13.64□□□□□ -0.23
ZIC4Q8N9L1 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC13.64□□□□□ -0.23
ZIC4Q8N9L1 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC13.64□□□□□ -0.23
ZIC4Q8N9L1 CLUHP6-201ENST00000580789 941 ntBASIC13.64□□□□□ -0.23
ZIC4Q8N9L1 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC13.64□□□□□ -0.23
ZIC4Q8N9L1 ABBA01031660.1-201ENST00000635219 756 ntBASIC13.64□□□□□ -0.23
ZIC4Q8N9L1 PRSS30P-206ENST00000641773 873 ntBASIC13.64□□□□□ -0.23
ZIC4Q8N9L1 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
ZIC4Q8N9L1 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ZIC4Q8N9L1 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ZIC4Q8N9L1 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC13.64□□□□□ -0.23
ZIC4Q8N9L1 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
ZIC4Q8N9L1 AL359258.3-201ENST00000622910 2331 ntBASIC13.64□□□□□ -0.23
ZIC4Q8N9L1 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC13.64□□□□□ -0.23
ZIC4Q8N9L1 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC13.64□□□□□ -0.23
ZIC4Q8N9L1 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ZIC4Q8N9L1 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ZIC4Q8N9L1 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ZIC4Q8N9L1 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
ZIC4Q8N9L1 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC13.64□□□□□ -0.23
ZIC4Q8N9L1 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 64.3 ms