Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
TRAM1L1Q8N609 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC15.25■□□□□ 0.03
TRAM1L1Q8N609 TTTY23B-201ENST00000442790 549 ntBASIC15.25■□□□□ 0.03
TRAM1L1Q8N609 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TRAM1L1Q8N609 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TRAM1L1Q8N609 ATF5-205ENST00000600336 682 ntTSL 2 BASIC15.25■□□□□ 0.03
TRAM1L1Q8N609 AP005019.2-201ENST00000615104 511 ntBASIC15.25■□□□□ 0.03
TRAM1L1Q8N609 AL035252.4-201ENST00000624174 288 ntBASIC15.25■□□□□ 0.03
TRAM1L1Q8N609 USE1-206ENST00000595101 1776 ntTSL 2 BASIC15.25■□□□□ 0.03
TRAM1L1Q8N609 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC15.25■□□□□ 0.03
TRAM1L1Q8N609 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
TRAM1L1Q8N609 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TRAM1L1Q8N609 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAM1L1Q8N609 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAM1L1Q8N609 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TRAM1L1Q8N609 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAM1L1Q8N609 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC15.25■□□□□ 0.03
TRAM1L1Q8N609 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
TRAM1L1Q8N609 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC15.25■□□□□ 0.03
TRAM1L1Q8N609 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
TRAM1L1Q8N609 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAM1L1Q8N609 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TRAM1L1Q8N609 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC15.24■□□□□ 0.03
TRAM1L1Q8N609 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAM1L1Q8N609 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAM1L1Q8N609 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAM1L1Q8N609 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC15.24■□□□□ 0.03
TRAM1L1Q8N609 AC063926.2-201ENST00000623766 1308 ntBASIC15.24■□□□□ 0.03
TRAM1L1Q8N609 AC073347.1-201ENST00000421633 2643 ntBASIC15.24■□□□□ 0.03
TRAM1L1Q8N609 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC15.24■□□□□ 0.03
TRAM1L1Q8N609 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC15.24■□□□□ 0.03
TRAM1L1Q8N609 AL162727.3-201ENST00000635661 2787 ntBASIC15.24■□□□□ 0.03
TRAM1L1Q8N609 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAM1L1Q8N609 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
TRAM1L1Q8N609 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC15.24■□□□□ 0.03
TRAM1L1Q8N609 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC15.24■□□□□ 0.03
TRAM1L1Q8N609 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC15.24■□□□□ 0.03
TRAM1L1Q8N609 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC15.24■□□□□ 0.03
TRAM1L1Q8N609 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TRAM1L1Q8N609 AC093433.1-201ENST00000458048 571 ntBASIC15.24■□□□□ 0.03
TRAM1L1Q8N609 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
TRAM1L1Q8N609 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
TRAM1L1Q8N609 GIMAP3P-201ENST00000495150 836 ntBASIC15.24■□□□□ 0.03
TRAM1L1Q8N609 FUZ-207ENST00000526575 482 ntTSL 4 BASIC15.24■□□□□ 0.03
TRAM1L1Q8N609 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
TRAM1L1Q8N609 TDH-203ENST00000531764 1110 ntBASIC15.24■□□□□ 0.03
TRAM1L1Q8N609 PTP4A1P2-201ENST00000546033 454 ntBASIC15.24■□□□□ 0.03
TRAM1L1Q8N609 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC15.24■□□□□ 0.03
TRAM1L1Q8N609 PRSS30P-206ENST00000641773 873 ntBASIC15.24■□□□□ 0.03
TRAM1L1Q8N609 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TRAM1L1Q8N609 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TRAM1L1Q8N609 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
TRAM1L1Q8N609 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC15.24■□□□□ 0.03
TRAM1L1Q8N609 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
TRAM1L1Q8N609 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAM1L1Q8N609 AL158070.2-201ENST00000623713 1621 ntBASIC15.24■□□□□ 0.03
TRAM1L1Q8N609 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC15.24■□□□□ 0.03
TRAM1L1Q8N609 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
TRAM1L1Q8N609 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC15.24■□□□□ 0.03
TRAM1L1Q8N609 PGR-210ENST00000619228 3038 ntTSL 5 BASIC15.24■□□□□ 0.03
TRAM1L1Q8N609 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
TRAM1L1Q8N609 AC138035.3-201ENST00000622706 2791 ntBASIC15.24■□□□□ 0.03
TRAM1L1Q8N609 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAM1L1Q8N609 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
TRAM1L1Q8N609 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC15.24■□□□□ 0.03
TRAM1L1Q8N609 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAM1L1Q8N609 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
TRAM1L1Q8N609 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
TRAM1L1Q8N609 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAM1L1Q8N609 AL109954.1-202ENST00000564051 2148 ntBASIC15.23■□□□□ 0.03
TRAM1L1Q8N609 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TRAM1L1Q8N609 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TRAM1L1Q8N609 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TRAM1L1Q8N609 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TRAM1L1Q8N609 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAM1L1Q8N609 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TRAM1L1Q8N609 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC15.23■□□□□ 0.03
TRAM1L1Q8N609 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAM1L1Q8N609 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAM1L1Q8N609 AC012508.2-201ENST00000567613 1472 ntBASIC15.23■□□□□ 0.03
TRAM1L1Q8N609 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAM1L1Q8N609 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAM1L1Q8N609 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TRAM1L1Q8N609 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
TRAM1L1Q8N609 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
TRAM1L1Q8N609 PGGT1BP2-201ENST00000398621 1028 ntBASIC15.23■□□□□ 0.03
TRAM1L1Q8N609 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAM1L1Q8N609 AC114812.1-204ENST00000449669 728 ntBASIC15.23■□□□□ 0.03
TRAM1L1Q8N609 AC022137.2-201ENST00000503482 481 ntBASIC15.23■□□□□ 0.03
TRAM1L1Q8N609 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC15.23■□□□□ 0.03
TRAM1L1Q8N609 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC15.23■□□□□ 0.03
TRAM1L1Q8N609 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC15.23■□□□□ 0.03
TRAM1L1Q8N609 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAM1L1Q8N609 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TRAM1L1Q8N609 KSR1-207ENST00000578981 748 ntTSL 4 BASIC15.23■□□□□ 0.03
TRAM1L1Q8N609 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC15.23■□□□□ 0.03
TRAM1L1Q8N609 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
TRAM1L1Q8N609 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAM1L1Q8N609 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAM1L1Q8N609 AC092384.3-202ENST00000564646 2873 ntBASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms