Protein–RNA interactions for Protein: Q8IY92

SLX4, Structure-specific endonuclease subunit SLX4, humanhuman

Predictions only

Length 1,834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4Q8IY92 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC18.39■□□□□ 0.53
SLX4Q8IY92 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SLX4Q8IY92 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC18.39■□□□□ 0.53
SLX4Q8IY92 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SLX4Q8IY92 PGAP2-208ENST00000464229 863 ntTSL 3 BASIC18.39■□□□□ 0.53
SLX4Q8IY92 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC18.39■□□□□ 0.53
SLX4Q8IY92 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC18.39■□□□□ 0.53
SLX4Q8IY92 AQP8-202ENST00000566125 1276 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SLX4Q8IY92 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SLX4Q8IY92 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SLX4Q8IY92 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC18.39■□□□□ 0.53
SLX4Q8IY92 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC18.39■□□□□ 0.53
SLX4Q8IY92 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC18.38■□□□□ 0.53
SLX4Q8IY92 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SLX4Q8IY92 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC18.38■□□□□ 0.53
SLX4Q8IY92 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SLX4Q8IY92 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SLX4Q8IY92 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC18.38■□□□□ 0.53
SLX4Q8IY92 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SLX4Q8IY92 ZBTB45P1-201ENST00000452761 1456 ntBASIC18.38■□□□□ 0.53
SLX4Q8IY92 AC015909.3-201ENST00000572855 1794 ntBASIC18.38■□□□□ 0.53
SLX4Q8IY92 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SLX4Q8IY92 SPACA3-201ENST00000269053 817 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
SLX4Q8IY92 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SLX4Q8IY92 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SLX4Q8IY92 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC18.38■□□□□ 0.53
SLX4Q8IY92 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
SLX4Q8IY92 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC18.38■□□□□ 0.53
SLX4Q8IY92 FANCA-205ENST00000543736 1000 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SLX4Q8IY92 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC18.38■□□□□ 0.53
SLX4Q8IY92 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SLX4Q8IY92 SPACA3-205ENST00000580599 949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
SLX4Q8IY92 MIR4649-201ENST00000582839 64 ntBASIC18.38■□□□□ 0.53
SLX4Q8IY92 NAT9-220ENST00000582870 896 ntTSL 5 BASIC18.38■□□□□ 0.53
SLX4Q8IY92 HPN-206ENST00000597419 1212 ntTSL 5 BASIC18.38■□□□□ 0.53
SLX4Q8IY92 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC18.38■□□□□ 0.53
SLX4Q8IY92 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC18.38■□□□□ 0.53
SLX4Q8IY92 CMC2-224ENST00000630396 481 ntTSL 5 BASIC18.38■□□□□ 0.53
SLX4Q8IY92 CYP4F23P-201ENST00000593402 1579 ntBASIC18.38■□□□□ 0.53
SLX4Q8IY92 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SLX4Q8IY92 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
SLX4Q8IY92 AL137783.1-201ENST00000623494 1896 ntBASIC18.38■□□□□ 0.53
SLX4Q8IY92 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
SLX4Q8IY92 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SLX4Q8IY92 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
SLX4Q8IY92 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
SLX4Q8IY92 FAM90A2P-201ENST00000511144 1395 ntBASIC18.38■□□□□ 0.53
SLX4Q8IY92 FAM90A25P-201ENST00000528404 1395 ntBASIC18.38■□□□□ 0.53
SLX4Q8IY92 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SLX4Q8IY92 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC18.38■□□□□ 0.53
SLX4Q8IY92 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SLX4Q8IY92 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
SLX4Q8IY92 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SLX4Q8IY92 AL603832.2-201ENST00000566195 2125 ntBASIC18.38■□□□□ 0.53
SLX4Q8IY92 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SLX4Q8IY92 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
SLX4Q8IY92 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SLX4Q8IY92 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
SLX4Q8IY92 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SLX4Q8IY92 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
SLX4Q8IY92 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SLX4Q8IY92 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SLX4Q8IY92 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC18.37■□□□□ 0.53
SLX4Q8IY92 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC18.37■□□□□ 0.53
SLX4Q8IY92 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC18.37■□□□□ 0.53
SLX4Q8IY92 AC005696.1-201ENST00000572876 443 ntTSL 2 BASIC18.37■□□□□ 0.53
SLX4Q8IY92 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC18.37■□□□□ 0.53
SLX4Q8IY92 AC005632.3-201ENST00000605544 308 ntBASIC18.37■□□□□ 0.53
SLX4Q8IY92 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC18.37■□□□□ 0.53
SLX4Q8IY92 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC18.37■□□□□ 0.53
SLX4Q8IY92 AC005618.3-201ENST00000624928 458 ntBASIC18.37■□□□□ 0.53
SLX4Q8IY92 LINC00969-257ENST00000625632 898 ntTSL 5 BASIC18.37■□□□□ 0.53
SLX4Q8IY92 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC18.37■□□□□ 0.53
SLX4Q8IY92 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SLX4Q8IY92 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
SLX4Q8IY92 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SLX4Q8IY92 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SLX4Q8IY92 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SLX4Q8IY92 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SLX4Q8IY92 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
SLX4Q8IY92 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SLX4Q8IY92 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SLX4Q8IY92 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SLX4Q8IY92 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.37■□□□□ 0.53
SLX4Q8IY92 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
SLX4Q8IY92 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SLX4Q8IY92 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
SLX4Q8IY92 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC18.37■□□□□ 0.53
SLX4Q8IY92 POU5F1P2-201ENST00000521750 823 ntBASIC18.37■□□□□ 0.53
SLX4Q8IY92 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC18.37■□□□□ 0.53
SLX4Q8IY92 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC18.37■□□□□ 0.53
SLX4Q8IY92 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC18.37■□□□□ 0.53
SLX4Q8IY92 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
SLX4Q8IY92 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC18.36■□□□□ 0.53
SLX4Q8IY92 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SLX4Q8IY92 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
SLX4Q8IY92 LINC01165-201ENST00000445190 1623 ntBASIC18.36■□□□□ 0.53
SLX4Q8IY92 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC18.36■□□□□ 0.53
SLX4Q8IY92 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SLX4Q8IY92 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms