Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC15.27■□□□□ 0.04
TRIM48Q8IWZ4 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRIM48Q8IWZ4 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC15.27■□□□□ 0.04
TRIM48Q8IWZ4 AC133539.2-201ENST00000604757 467 ntBASIC15.27■□□□□ 0.04
TRIM48Q8IWZ4 WFDC1-204ENST00000613603 549 ntBASIC15.27■□□□□ 0.04
TRIM48Q8IWZ4 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TRIM48Q8IWZ4 AL033527.5-201ENST00000641382 801 ntBASIC15.27■□□□□ 0.04
TRIM48Q8IWZ4 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
TRIM48Q8IWZ4 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRIM48Q8IWZ4 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
TRIM48Q8IWZ4 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
TRIM48Q8IWZ4 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC15.27■□□□□ 0.03
TRIM48Q8IWZ4 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC15.27■□□□□ 0.03
TRIM48Q8IWZ4 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC15.27■□□□□ 0.03
TRIM48Q8IWZ4 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
TRIM48Q8IWZ4 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC15.27■□□□□ 0.03
TRIM48Q8IWZ4 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
TRIM48Q8IWZ4 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC15.27■□□□□ 0.03
TRIM48Q8IWZ4 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
TRIM48Q8IWZ4 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC15.27■□□□□ 0.03
TRIM48Q8IWZ4 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC15.27■□□□□ 0.03
TRIM48Q8IWZ4 ACE-203ENST00000413513 2237 ntTSL 2 BASIC15.27■□□□□ 0.03
TRIM48Q8IWZ4 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.03
TRIM48Q8IWZ4 AC112504.1-201ENST00000623415 1841 ntBASIC15.27■□□□□ 0.03
TRIM48Q8IWZ4 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRIM48Q8IWZ4 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
TRIM48Q8IWZ4 SUPT20HL2-201ENST00000486479 2409 ntBASIC15.26■□□□□ 0.03
TRIM48Q8IWZ4 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
TRIM48Q8IWZ4 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TRIM48Q8IWZ4 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRIM48Q8IWZ4 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRIM48Q8IWZ4 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRIM48Q8IWZ4 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TRIM48Q8IWZ4 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
TRIM48Q8IWZ4 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRIM48Q8IWZ4 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRIM48Q8IWZ4 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRIM48Q8IWZ4 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
TRIM48Q8IWZ4 NSL1-201ENST00000366976 722 ntTSL 2 BASIC15.26■□□□□ 0.03
TRIM48Q8IWZ4 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRIM48Q8IWZ4 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
TRIM48Q8IWZ4 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC15.26■□□□□ 0.03
TRIM48Q8IWZ4 GALT-202ENST00000450095 1280 ntTSL 2 BASIC15.26■□□□□ 0.03
TRIM48Q8IWZ4 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC15.26■□□□□ 0.03
TRIM48Q8IWZ4 GIMAP3P-201ENST00000495150 836 ntBASIC15.26■□□□□ 0.03
TRIM48Q8IWZ4 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC15.26■□□□□ 0.03
TRIM48Q8IWZ4 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TRIM48Q8IWZ4 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
TRIM48Q8IWZ4 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC15.26■□□□□ 0.03
TRIM48Q8IWZ4 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
TRIM48Q8IWZ4 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
TRIM48Q8IWZ4 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC15.26■□□□□ 0.03
TRIM48Q8IWZ4 AL391069.4-201ENST00000609583 481 ntBASIC15.26■□□□□ 0.03
TRIM48Q8IWZ4 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
TRIM48Q8IWZ4 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
TRIM48Q8IWZ4 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRIM48Q8IWZ4 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRIM48Q8IWZ4 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRIM48Q8IWZ4 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC15.26■□□□□ 0.03
TRIM48Q8IWZ4 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TRIM48Q8IWZ4 CYP2AB1P-202ENST00000454440 1456 ntBASIC15.26■□□□□ 0.03
TRIM48Q8IWZ4 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRIM48Q8IWZ4 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
TRIM48Q8IWZ4 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRIM48Q8IWZ4 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TRIM48Q8IWZ4 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC15.26■□□□□ 0.03
TRIM48Q8IWZ4 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TRIM48Q8IWZ4 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRIM48Q8IWZ4 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TRIM48Q8IWZ4 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRIM48Q8IWZ4 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRIM48Q8IWZ4 AC010491.1-201ENST00000563101 2797 ntBASIC15.25■□□□□ 0.03
TRIM48Q8IWZ4 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRIM48Q8IWZ4 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TRIM48Q8IWZ4 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TRIM48Q8IWZ4 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
TRIM48Q8IWZ4 PRAL-201ENST00000624952 3286 ntBASIC15.25■□□□□ 0.03
TRIM48Q8IWZ4 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TRIM48Q8IWZ4 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TRIM48Q8IWZ4 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRIM48Q8IWZ4 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TRIM48Q8IWZ4 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC15.25■□□□□ 0.03
TRIM48Q8IWZ4 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC15.25■□□□□ 0.03
TRIM48Q8IWZ4 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
TRIM48Q8IWZ4 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRIM48Q8IWZ4 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRIM48Q8IWZ4 AC134915.1-201ENST00000426461 574 ntBASIC15.25■□□□□ 0.03
TRIM48Q8IWZ4 AL442647.2-201ENST00000429864 857 ntBASIC15.25■□□□□ 0.03
TRIM48Q8IWZ4 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC15.25■□□□□ 0.03
TRIM48Q8IWZ4 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC15.25■□□□□ 0.03
TRIM48Q8IWZ4 TTTY23B-201ENST00000442790 549 ntBASIC15.25■□□□□ 0.03
TRIM48Q8IWZ4 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC15.25■□□□□ 0.03
TRIM48Q8IWZ4 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TRIM48Q8IWZ4 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC15.25■□□□□ 0.03
TRIM48Q8IWZ4 AL049840.4-201ENST00000602422 811 ntBASIC15.25■□□□□ 0.03
TRIM48Q8IWZ4 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC15.25■□□□□ 0.03
TRIM48Q8IWZ4 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
TRIM48Q8IWZ4 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC15.25■□□□□ 0.03
TRIM48Q8IWZ4 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC15.25■□□□□ 0.03
TRIM48Q8IWZ4 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms