Protein–RNA interactions for Protein: Q86UN2

RTN4RL1, Reticulon-4 receptor-like 1, humanhuman

Predicted RBP Predictions only

Length 441 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4RL1Q86UN2 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RTN4RL1Q86UN2 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RTN4RL1Q86UN2 AC091046.1-201ENST00000331871 207 ntBASIC16.41■□□□□ 0.22
RTN4RL1Q86UN2 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RTN4RL1Q86UN2 CRCP-204ENST00000398684 492 ntTSL 2 BASIC16.41■□□□□ 0.22
RTN4RL1Q86UN2 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RTN4RL1Q86UN2 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RTN4RL1Q86UN2 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC16.41■□□□□ 0.22
RTN4RL1Q86UN2 AC022217.1-201ENST00000521069 738 ntBASIC16.41■□□□□ 0.22
RTN4RL1Q86UN2 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC16.41■□□□□ 0.22
RTN4RL1Q86UN2 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC16.41■□□□□ 0.22
RTN4RL1Q86UN2 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC16.41■□□□□ 0.22
RTN4RL1Q86UN2 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RTN4RL1Q86UN2 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RTN4RL1Q86UN2 BNIP3P13-201ENST00000599968 566 ntBASIC16.41■□□□□ 0.22
RTN4RL1Q86UN2 AL358472.3-201ENST00000608147 415 ntBASIC16.41■□□□□ 0.22
RTN4RL1Q86UN2 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC16.41■□□□□ 0.22
RTN4RL1Q86UN2 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC16.41■□□□□ 0.22
RTN4RL1Q86UN2 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
RTN4RL1Q86UN2 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC16.41■□□□□ 0.22
RTN4RL1Q86UN2 AL118508.1-201ENST00000613502 2345 ntBASIC16.41■□□□□ 0.22
RTN4RL1Q86UN2 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
RTN4RL1Q86UN2 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC16.41■□□□□ 0.22
RTN4RL1Q86UN2 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RTN4RL1Q86UN2 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RTN4RL1Q86UN2 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RTN4RL1Q86UN2 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RTN4RL1Q86UN2 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RTN4RL1Q86UN2 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RTN4RL1Q86UN2 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RTN4RL1Q86UN2 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RTN4RL1Q86UN2 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RTN4RL1Q86UN2 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
RTN4RL1Q86UN2 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
RTN4RL1Q86UN2 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC16.4■□□□□ 0.22
RTN4RL1Q86UN2 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RTN4RL1Q86UN2 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
RTN4RL1Q86UN2 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
RTN4RL1Q86UN2 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RTN4RL1Q86UN2 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC16.4■□□□□ 0.22
RTN4RL1Q86UN2 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RTN4RL1Q86UN2 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RTN4RL1Q86UN2 AC104073.2-201ENST00000453737 312 ntBASIC16.4■□□□□ 0.22
RTN4RL1Q86UN2 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC16.4■□□□□ 0.22
RTN4RL1Q86UN2 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC16.4■□□□□ 0.22
RTN4RL1Q86UN2 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC16.4■□□□□ 0.22
RTN4RL1Q86UN2 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RTN4RL1Q86UN2 RN7SL190P-201ENST00000582519 257 ntBASIC16.4■□□□□ 0.22
RTN4RL1Q86UN2 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC16.4■□□□□ 0.22
RTN4RL1Q86UN2 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC16.4■□□□□ 0.22
RTN4RL1Q86UN2 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC16.4■□□□□ 0.22
RTN4RL1Q86UN2 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC16.4■□□□□ 0.22
RTN4RL1Q86UN2 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RTN4RL1Q86UN2 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RTN4RL1Q86UN2 AC020916.1-201ENST00000587762 1774 ntBASIC16.4■□□□□ 0.22
RTN4RL1Q86UN2 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RTN4RL1Q86UN2 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC16.4■□□□□ 0.22
RTN4RL1Q86UN2 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RTN4RL1Q86UN2 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RTN4RL1Q86UN2 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RTN4RL1Q86UN2 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC16.39■□□□□ 0.22
RTN4RL1Q86UN2 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
RTN4RL1Q86UN2 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RTN4RL1Q86UN2 AC009093.2-202ENST00000620513 2079 ntBASIC16.39■□□□□ 0.21
RTN4RL1Q86UN2 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RTN4RL1Q86UN2 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
RTN4RL1Q86UN2 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RTN4RL1Q86UN2 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
RTN4RL1Q86UN2 BANP-204ENST00000393208 2283 ntTSL 2 BASIC16.39■□□□□ 0.21
RTN4RL1Q86UN2 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
RTN4RL1Q86UN2 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC16.39■□□□□ 0.21
RTN4RL1Q86UN2 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RTN4RL1Q86UN2 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RTN4RL1Q86UN2 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RTN4RL1Q86UN2 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
RTN4RL1Q86UN2 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
RTN4RL1Q86UN2 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RTN4RL1Q86UN2 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RTN4RL1Q86UN2 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RTN4RL1Q86UN2 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RTN4RL1Q86UN2 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC16.39■□□□□ 0.21
RTN4RL1Q86UN2 AC021723.1-201ENST00000486306 515 ntBASIC16.39■□□□□ 0.21
RTN4RL1Q86UN2 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC16.39■□□□□ 0.21
RTN4RL1Q86UN2 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC16.39■□□□□ 0.21
RTN4RL1Q86UN2 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
RTN4RL1Q86UN2 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC16.39■□□□□ 0.21
RTN4RL1Q86UN2 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC16.39■□□□□ 0.21
RTN4RL1Q86UN2 AP001505.2-201ENST00000616815 443 ntBASIC16.39■□□□□ 0.21
RTN4RL1Q86UN2 AL023803.2-201ENST00000620080 638 ntBASIC16.39■□□□□ 0.21
RTN4RL1Q86UN2 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
RTN4RL1Q86UN2 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RTN4RL1Q86UN2 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC16.39■□□□□ 0.21
RTN4RL1Q86UN2 AL137783.1-201ENST00000623494 1896 ntBASIC16.39■□□□□ 0.21
RTN4RL1Q86UN2 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RTN4RL1Q86UN2 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC16.39■□□□□ 0.21
RTN4RL1Q86UN2 AC092850.2-201ENST00000623821 2697 ntBASIC16.39■□□□□ 0.21
RTN4RL1Q86UN2 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC16.39■□□□□ 0.21
RTN4RL1Q86UN2 AC090616.6-203ENST00000579186 1945 ntBASIC16.39■□□□□ 0.21
RTN4RL1Q86UN2 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
RTN4RL1Q86UN2 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 59.8 ms