Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 LINC01101-201ENST00000622953 1884 ntBASIC16.29■□□□□ 0.2
RNF43Q68DV7 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
RNF43Q68DV7 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RNF43Q68DV7 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RNF43Q68DV7 AC106881.1-201ENST00000605849 3329 ntBASIC16.29■□□□□ 0.2
RNF43Q68DV7 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
RNF43Q68DV7 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RNF43Q68DV7 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
RNF43Q68DV7 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC16.28■□□□□ 0.2
RNF43Q68DV7 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RNF43Q68DV7 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
RNF43Q68DV7 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
RNF43Q68DV7 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RNF43Q68DV7 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC16.28■□□□□ 0.2
RNF43Q68DV7 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RNF43Q68DV7 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC16.28■□□□□ 0.2
RNF43Q68DV7 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RNF43Q68DV7 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
RNF43Q68DV7 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
RNF43Q68DV7 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC16.28■□□□□ 0.2
RNF43Q68DV7 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC16.28■□□□□ 0.2
RNF43Q68DV7 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC16.28■□□□□ 0.2
RNF43Q68DV7 TTTY23B-201ENST00000442790 549 ntBASIC16.28■□□□□ 0.2
RNF43Q68DV7 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC16.28■□□□□ 0.2
RNF43Q68DV7 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC16.28■□□□□ 0.2
RNF43Q68DV7 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC16.28■□□□□ 0.2
RNF43Q68DV7 TPRX2P-201ENST00000535362 881 ntBASIC16.28■□□□□ 0.2
RNF43Q68DV7 RARRES2P5-201ENST00000564013 466 ntBASIC16.28■□□□□ 0.2
RNF43Q68DV7 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RNF43Q68DV7 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
RNF43Q68DV7 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
RNF43Q68DV7 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC16.28■□□□□ 0.2
RNF43Q68DV7 AC007431.3-201ENST00000623221 587 ntBASIC16.28■□□□□ 0.2
RNF43Q68DV7 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC16.28■□□□□ 0.2
RNF43Q68DV7 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
RNF43Q68DV7 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RNF43Q68DV7 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
RNF43Q68DV7 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
RNF43Q68DV7 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RNF43Q68DV7 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
RNF43Q68DV7 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC16.28■□□□□ 0.2
RNF43Q68DV7 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
RNF43Q68DV7 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RNF43Q68DV7 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC16.28■□□□□ 0.2
RNF43Q68DV7 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RNF43Q68DV7 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RNF43Q68DV7 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
RNF43Q68DV7 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RNF43Q68DV7 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RNF43Q68DV7 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC16.28■□□□□ 0.2
RNF43Q68DV7 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RNF43Q68DV7 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RNF43Q68DV7 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
RNF43Q68DV7 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
RNF43Q68DV7 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RNF43Q68DV7 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
RNF43Q68DV7 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
RNF43Q68DV7 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC16.27■□□□□ 0.2
RNF43Q68DV7 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RNF43Q68DV7 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
RNF43Q68DV7 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RNF43Q68DV7 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RNF43Q68DV7 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC16.27■□□□□ 0.2
RNF43Q68DV7 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC16.27■□□□□ 0.2
RNF43Q68DV7 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RNF43Q68DV7 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC16.27■□□□□ 0.2
RNF43Q68DV7 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
RNF43Q68DV7 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC16.27■□□□□ 0.2
RNF43Q68DV7 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
RNF43Q68DV7 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RNF43Q68DV7 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
RNF43Q68DV7 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
RNF43Q68DV7 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC16.27■□□□□ 0.2
RNF43Q68DV7 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC16.27■□□□□ 0.2
RNF43Q68DV7 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC16.27■□□□□ 0.2
RNF43Q68DV7 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC16.27■□□□□ 0.2
RNF43Q68DV7 AL033527.4-201ENST00000641026 673 ntBASIC16.27■□□□□ 0.2
RNF43Q68DV7 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RNF43Q68DV7 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC16.27■□□□□ 0.2
RNF43Q68DV7 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC16.27■□□□□ 0.2
RNF43Q68DV7 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC16.27■□□□□ 0.19
RNF43Q68DV7 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RNF43Q68DV7 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
RNF43Q68DV7 GRK6P1-201ENST00000400595 1711 ntBASIC16.27■□□□□ 0.19
RNF43Q68DV7 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC16.27■□□□□ 0.19
RNF43Q68DV7 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RNF43Q68DV7 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
RNF43Q68DV7 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.19
RNF43Q68DV7 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RNF43Q68DV7 MECR-202ENST00000373791 2416 ntTSL 2 BASIC16.27■□□□□ 0.19
RNF43Q68DV7 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
RNF43Q68DV7 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC16.27■□□□□ 0.19
RNF43Q68DV7 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RNF43Q68DV7 DEK-201ENST00000244776 1441 ntTSL 2 BASIC16.27■□□□□ 0.19
RNF43Q68DV7 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RNF43Q68DV7 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.19
RNF43Q68DV7 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC16.27■□□□□ 0.19
RNF43Q68DV7 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
RNF43Q68DV7 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
RNF43Q68DV7 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC16.27■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms