Protein–RNA interactions for Protein: P78357

CNTNAP1, Contactin-associated protein 1, humanhuman

Predictions only

Length 1,384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP1P78357 RBM8B-201ENST00000555532 525 ntBASIC18.13■□□□□ 0.49
CNTNAP1P78357 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC18.13■□□□□ 0.49
CNTNAP1P78357 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC18.13■□□□□ 0.49
CNTNAP1P78357 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC18.13■□□□□ 0.49
CNTNAP1P78357 AC004923.1-202ENST00000642106 209 ntBASIC18.13■□□□□ 0.49
CNTNAP1P78357 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CNTNAP1P78357 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CNTNAP1P78357 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC18.13■□□□□ 0.49
CNTNAP1P78357 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC18.13■□□□□ 0.49
CNTNAP1P78357 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC18.13■□□□□ 0.49
CNTNAP1P78357 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CNTNAP1P78357 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC18.13■□□□□ 0.49
CNTNAP1P78357 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC18.13■□□□□ 0.49
CNTNAP1P78357 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
CNTNAP1P78357 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CNTNAP1P78357 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC18.12■□□□□ 0.49
CNTNAP1P78357 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CNTNAP1P78357 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
CNTNAP1P78357 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC18.12■□□□□ 0.49
CNTNAP1P78357 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC18.12■□□□□ 0.49
CNTNAP1P78357 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CNTNAP1P78357 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CNTNAP1P78357 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CNTNAP1P78357 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
CNTNAP1P78357 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CNTNAP1P78357 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC18.12■□□□□ 0.49
CNTNAP1P78357 AC024909.3-201ENST00000611513 2257 ntBASIC18.12■□□□□ 0.49
CNTNAP1P78357 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CNTNAP1P78357 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CNTNAP1P78357 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CNTNAP1P78357 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC18.12■□□□□ 0.49
CNTNAP1P78357 RPS9P1-201ENST00000419943 583 ntBASIC18.12■□□□□ 0.49
CNTNAP1P78357 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC18.12■□□□□ 0.49
CNTNAP1P78357 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC18.12■□□□□ 0.49
CNTNAP1P78357 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
CNTNAP1P78357 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC18.12■□□□□ 0.49
CNTNAP1P78357 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC18.12■□□□□ 0.49
CNTNAP1P78357 AC006449.5-201ENST00000610658 2098 ntBASIC18.12■□□□□ 0.49
CNTNAP1P78357 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CNTNAP1P78357 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CNTNAP1P78357 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC18.12■□□□□ 0.49
CNTNAP1P78357 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CNTNAP1P78357 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC18.12■□□□□ 0.49
CNTNAP1P78357 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CNTNAP1P78357 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC18.12■□□□□ 0.49
CNTNAP1P78357 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CNTNAP1P78357 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CNTNAP1P78357 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC18.12■□□□□ 0.49
CNTNAP1P78357 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC18.12■□□□□ 0.49
CNTNAP1P78357 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CNTNAP1P78357 KRT8P4-201ENST00000509735 1454 ntBASIC18.11■□□□□ 0.49
CNTNAP1P78357 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC18.11■□□□□ 0.49
CNTNAP1P78357 AC074138.1-201ENST00000611182 1303 ntBASIC18.11■□□□□ 0.49
CNTNAP1P78357 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CNTNAP1P78357 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CNTNAP1P78357 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CNTNAP1P78357 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC18.11■□□□□ 0.49
CNTNAP1P78357 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC18.11■□□□□ 0.49
CNTNAP1P78357 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
CNTNAP1P78357 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CNTNAP1P78357 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
CNTNAP1P78357 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
CNTNAP1P78357 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CNTNAP1P78357 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
CNTNAP1P78357 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
CNTNAP1P78357 GON7-201ENST00000306954 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CNTNAP1P78357 GAD1-201ENST00000344257 1029 ntTSL 5 BASIC18.11■□□□□ 0.49
CNTNAP1P78357 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CNTNAP1P78357 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
CNTNAP1P78357 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CNTNAP1P78357 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CNTNAP1P78357 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
CNTNAP1P78357 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CNTNAP1P78357 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC18.11■□□□□ 0.49
CNTNAP1P78357 AC061961.1-201ENST00000443901 432 ntTSL 3 BASIC18.11■□□□□ 0.49
CNTNAP1P78357 AL138731.1-201ENST00000452624 739 ntTSL 3 BASIC18.11■□□□□ 0.49
CNTNAP1P78357 RNMTL1P1-201ENST00000454103 560 ntBASIC18.11■□□□□ 0.49
CNTNAP1P78357 AC079112.1-201ENST00000454972 939 ntBASIC18.11■□□□□ 0.49
CNTNAP1P78357 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC18.11■□□□□ 0.49
CNTNAP1P78357 AC100850.1-201ENST00000506768 649 ntBASIC18.11■□□□□ 0.49
CNTNAP1P78357 AC022616.1-201ENST00000518688 554 ntBASIC18.11■□□□□ 0.49
CNTNAP1P78357 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
CNTNAP1P78357 AP002803.1-201ENST00000528836 498 ntBASIC18.11■□□□□ 0.49
CNTNAP1P78357 AP000842.2-201ENST00000533033 517 ntTSL 4 BASIC18.11■□□□□ 0.49
CNTNAP1P78357 DNM1P51-201ENST00000558149 522 ntBASIC18.11■□□□□ 0.49
CNTNAP1P78357 CRTC3-AS1-202ENST00000559531 657 ntTSL 3 BASIC18.11■□□□□ 0.49
CNTNAP1P78357 AC006435.2-201ENST00000574290 846 ntTSL 5 BASIC18.11■□□□□ 0.49
CNTNAP1P78357 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC18.11■□□□□ 0.49
CNTNAP1P78357 RN7SL163P-201ENST00000583100 276 ntBASIC18.11■□□□□ 0.49
CNTNAP1P78357 ZNF790-AS1-203ENST00000588906 850 ntTSL 2 BASIC18.11■□□□□ 0.49
CNTNAP1P78357 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC18.11■□□□□ 0.49
CNTNAP1P78357 AC242376.2-201ENST00000619355 883 ntBASIC18.11■□□□□ 0.49
CNTNAP1P78357 AC138466.4-201ENST00000623965 852 ntBASIC18.11■□□□□ 0.49
CNTNAP1P78357 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CNTNAP1P78357 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CNTNAP1P78357 SUPT20HL2-201ENST00000486479 2409 ntBASIC18.11■□□□□ 0.49
CNTNAP1P78357 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
CNTNAP1P78357 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CNTNAP1P78357 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC18.11■□□□□ 0.49
CNTNAP1P78357 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms