Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 AKAP8P1-201ENST00000434743 1349 ntBASIC12.7□□□□□ -0.38
SPCS3P61009 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
SPCS3P61009 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SPCS3P61009 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SPCS3P61009 UCKL1-AS1-201ENST00000623569 3602 ntBASIC12.7□□□□□ -0.38
SPCS3P61009 MICB-202ENST00000399150 2346 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
SPCS3P61009 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SPCS3P61009 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SPCS3P61009 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
SPCS3P61009 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC12.7□□□□□ -0.38
SPCS3P61009 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
SPCS3P61009 CBR1-202ENST00000399191 838 ntTSL 3 BASIC12.7□□□□□ -0.38
SPCS3P61009 PP14571-201ENST00000404327 934 ntTSL 2 BASIC12.7□□□□□ -0.38
SPCS3P61009 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC12.7□□□□□ -0.38
SPCS3P61009 RNA5SP410-201ENST00000516285 106 ntBASIC12.7□□□□□ -0.38
SPCS3P61009 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC12.7□□□□□ -0.38
SPCS3P61009 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC12.7□□□□□ -0.38
SPCS3P61009 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC12.7□□□□□ -0.38
SPCS3P61009 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC12.7□□□□□ -0.38
SPCS3P61009 AC018845.2-201ENST00000568326 409 ntBASIC12.7□□□□□ -0.38
SPCS3P61009 AP002472.1-201ENST00000577490 586 ntBASIC12.7□□□□□ -0.38
SPCS3P61009 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC12.7□□□□□ -0.38
SPCS3P61009 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC12.7□□□□□ -0.38
SPCS3P61009 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SPCS3P61009 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
SPCS3P61009 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
SPCS3P61009 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SPCS3P61009 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SPCS3P61009 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC12.7□□□□□ -0.38
SPCS3P61009 AC023024.2-201ENST00000623561 1993 ntBASIC12.7□□□□□ -0.38
SPCS3P61009 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SPCS3P61009 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC12.7□□□□□ -0.38
SPCS3P61009 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC12.7□□□□□ -0.38
SPCS3P61009 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
SPCS3P61009 KRT8P37-201ENST00000451609 1420 ntBASIC12.7□□□□□ -0.38
SPCS3P61009 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SPCS3P61009 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC12.7□□□□□ -0.38
SPCS3P61009 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
SPCS3P61009 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
SPCS3P61009 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC12.69□□□□□ -0.38
SPCS3P61009 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SPCS3P61009 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SPCS3P61009 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SPCS3P61009 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC12.69□□□□□ -0.38
SPCS3P61009 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
SPCS3P61009 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC12.69□□□□□ -0.38
SPCS3P61009 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SPCS3P61009 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
SPCS3P61009 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SPCS3P61009 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC12.69□□□□□ -0.38
SPCS3P61009 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC12.69□□□□□ -0.38
SPCS3P61009 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
SPCS3P61009 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
SPCS3P61009 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
SPCS3P61009 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SPCS3P61009 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SPCS3P61009 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SPCS3P61009 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC12.69□□□□□ -0.38
SPCS3P61009 AL139010.1-201ENST00000454878 894 ntBASIC12.69□□□□□ -0.38
SPCS3P61009 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC12.69□□□□□ -0.38
SPCS3P61009 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC12.69□□□□□ -0.38
SPCS3P61009 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC12.69□□□□□ -0.38
SPCS3P61009 AL662844.1-201ENST00000546340 181 ntBASIC12.69□□□□□ -0.38
SPCS3P61009 PDPK2P-202ENST00000562415 1191 ntBASIC12.69□□□□□ -0.38
SPCS3P61009 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
SPCS3P61009 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC12.69□□□□□ -0.38
SPCS3P61009 AC104692.2-201ENST00000603054 253 ntBASIC12.69□□□□□ -0.38
SPCS3P61009 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC12.69□□□□□ -0.38
SPCS3P61009 AC008267.7-201ENST00000624570 1194 ntBASIC12.69□□□□□ -0.38
SPCS3P61009 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
SPCS3P61009 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC12.69□□□□□ -0.38
SPCS3P61009 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC12.69□□□□□ -0.38
SPCS3P61009 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC12.69□□□□□ -0.38
SPCS3P61009 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC12.69□□□□□ -0.38
SPCS3P61009 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
SPCS3P61009 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SPCS3P61009 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
SPCS3P61009 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
SPCS3P61009 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SPCS3P61009 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC12.69□□□□□ -0.38
SPCS3P61009 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SPCS3P61009 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC12.69□□□□□ -0.38
SPCS3P61009 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC12.69□□□□□ -0.38
SPCS3P61009 APP-205ENST00000358918 2366 ntTSL 5 BASIC12.69□□□□□ -0.38
SPCS3P61009 CICP17-201ENST00000418553 2377 ntBASIC12.69□□□□□ -0.38
SPCS3P61009 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC12.69□□□□□ -0.38
SPCS3P61009 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
SPCS3P61009 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
SPCS3P61009 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC12.69□□□□□ -0.38
SPCS3P61009 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC12.68□□□□□ -0.38
SPCS3P61009 AC099521.3-201ENST00000624251 2938 ntBASIC12.68□□□□□ -0.38
SPCS3P61009 ZEB1-AS1-208ENST00000607166 2503 ntBASIC12.68□□□□□ -0.38
SPCS3P61009 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SPCS3P61009 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC12.68□□□□□ -0.38
SPCS3P61009 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
SPCS3P61009 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SPCS3P61009 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SPCS3P61009 FOXO1B-201ENST00000504678 1527 ntBASIC12.68□□□□□ -0.38
SPCS3P61009 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SPCS3P61009 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms