Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
GFRA1P56159 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
GFRA1P56159 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC13.81□□□□□ -0.2
GFRA1P56159 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC13.81□□□□□ -0.2
GFRA1P56159 AC136621.1-201ENST00000624017 2304 ntBASIC13.81□□□□□ -0.2
GFRA1P56159 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC13.81□□□□□ -0.2
GFRA1P56159 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC13.81□□□□□ -0.2
GFRA1P56159 AC148477.4-201ENST00000613430 1793 ntBASIC13.81□□□□□ -0.2
GFRA1P56159 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
GFRA1P56159 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
GFRA1P56159 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
GFRA1P56159 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
GFRA1P56159 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC13.81□□□□□ -0.2
GFRA1P56159 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC13.81□□□□□ -0.2
GFRA1P56159 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
GFRA1P56159 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC13.81□□□□□ -0.2
GFRA1P56159 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
GFRA1P56159 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
GFRA1P56159 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC13.81□□□□□ -0.2
GFRA1P56159 AL139094.1-201ENST00000405549 1188 ntBASIC13.81□□□□□ -0.2
GFRA1P56159 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
GFRA1P56159 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC13.81□□□□□ -0.2
GFRA1P56159 FTH1P14-201ENST00000482930 551 ntBASIC13.81□□□□□ -0.2
GFRA1P56159 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC13.81□□□□□ -0.2
GFRA1P56159 AC119751.2-201ENST00000504529 210 ntBASIC13.81□□□□□ -0.2
GFRA1P56159 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
GFRA1P56159 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC13.81□□□□□ -0.2
GFRA1P56159 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC13.81□□□□□ -0.2
GFRA1P56159 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC13.81□□□□□ -0.2
GFRA1P56159 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC13.81□□□□□ -0.2
GFRA1P56159 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC13.81□□□□□ -0.2
GFRA1P56159 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC13.81□□□□□ -0.2
GFRA1P56159 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
GFRA1P56159 MIR6775-201ENST00000617557 69 ntBASIC13.81□□□□□ -0.2
GFRA1P56159 WNT11-204ENST00000621122 789 ntTSL 5 BASIC13.81□□□□□ -0.2
GFRA1P56159 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC13.81□□□□□ -0.2
GFRA1P56159 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
GFRA1P56159 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
GFRA1P56159 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
GFRA1P56159 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC13.81□□□□□ -0.2
GFRA1P56159 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
GFRA1P56159 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
GFRA1P56159 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
GFRA1P56159 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
GFRA1P56159 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC13.81□□□□□ -0.2
GFRA1P56159 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC13.81□□□□□ -0.2
GFRA1P56159 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC13.81□□□□□ -0.2
GFRA1P56159 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
GFRA1P56159 KRT8P14-201ENST00000414254 1442 ntBASIC13.81□□□□□ -0.2
GFRA1P56159 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
GFRA1P56159 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
GFRA1P56159 ZBTB45P1-201ENST00000452761 1456 ntBASIC13.8□□□□□ -0.2
GFRA1P56159 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
GFRA1P56159 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
GFRA1P56159 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
GFRA1P56159 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
GFRA1P56159 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
GFRA1P56159 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
GFRA1P56159 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
GFRA1P56159 ANKRD26P3-201ENST00000454044 2748 ntBASIC13.8□□□□□ -0.2
GFRA1P56159 AC008741.2-201ENST00000612792 3115 ntBASIC13.8□□□□□ -0.2
GFRA1P56159 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
GFRA1P56159 AC112693.3-201ENST00000624819 1983 ntBASIC13.8□□□□□ -0.2
GFRA1P56159 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC13.8□□□□□ -0.2
GFRA1P56159 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC13.8□□□□□ -0.2
GFRA1P56159 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
GFRA1P56159 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
GFRA1P56159 ANKRD19P-201ENST00000338192 862 ntBASIC13.8□□□□□ -0.2
GFRA1P56159 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC13.8□□□□□ -0.2
GFRA1P56159 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
GFRA1P56159 MIR658-201ENST00000385210 100 ntBASIC13.8□□□□□ -0.2
GFRA1P56159 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
GFRA1P56159 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
GFRA1P56159 AC016694.1-201ENST00000434179 700 ntBASIC13.8□□□□□ -0.2
GFRA1P56159 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
GFRA1P56159 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC13.8□□□□□ -0.2
GFRA1P56159 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC13.8□□□□□ -0.2
GFRA1P56159 AC007551.1-201ENST00000457394 519 ntBASIC13.8□□□□□ -0.2
GFRA1P56159 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC13.8□□□□□ -0.2
GFRA1P56159 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC13.8□□□□□ -0.2
GFRA1P56159 AP000812.2-201ENST00000538934 718 ntBASIC13.8□□□□□ -0.2
GFRA1P56159 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
GFRA1P56159 AL008721.1-201ENST00000609964 604 ntBASIC13.8□□□□□ -0.2
GFRA1P56159 AC145423.3-201ENST00000615987 467 ntBASIC13.8□□□□□ -0.2
GFRA1P56159 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC13.8□□□□□ -0.2
GFRA1P56159 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
GFRA1P56159 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
GFRA1P56159 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
GFRA1P56159 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC13.8□□□□□ -0.2
GFRA1P56159 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC13.8□□□□□ -0.2
GFRA1P56159 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
GFRA1P56159 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
GFRA1P56159 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
GFRA1P56159 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
GFRA1P56159 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
GFRA1P56159 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
GFRA1P56159 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
GFRA1P56159 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
GFRA1P56159 API5-202ENST00000420461 2009 ntTSL 2 BASIC13.8□□□□□ -0.2
GFRA1P56159 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms