Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC15.77■□□□□ 0.12
CDH4P55283 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
CDH4P55283 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
CDH4P55283 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CDH4P55283 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CDH4P55283 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
CDH4P55283 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CDH4P55283 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CDH4P55283 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CDH4P55283 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
CDH4P55283 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC15.77■□□□□ 0.11
CDH4P55283 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CDH4P55283 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
CDH4P55283 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CDH4P55283 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC15.76■□□□□ 0.11
CDH4P55283 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CDH4P55283 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CDH4P55283 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC15.76■□□□□ 0.11
CDH4P55283 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CDH4P55283 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CDH4P55283 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC15.76■□□□□ 0.11
CDH4P55283 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC15.76■□□□□ 0.11
CDH4P55283 AL158070.2-201ENST00000623713 1621 ntBASIC15.76■□□□□ 0.11
CDH4P55283 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CDH4P55283 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CDH4P55283 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CDH4P55283 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CDH4P55283 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC15.76■□□□□ 0.11
CDH4P55283 AC005229.1-201ENST00000392885 409 ntBASIC15.76■□□□□ 0.11
CDH4P55283 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC15.76■□□□□ 0.11
CDH4P55283 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC15.76■□□□□ 0.11
CDH4P55283 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
CDH4P55283 WBP2-203ENST00000433525 928 ntTSL 2 BASIC15.76■□□□□ 0.11
CDH4P55283 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
CDH4P55283 AP001889.1-201ENST00000525414 633 ntBASIC15.76■□□□□ 0.11
CDH4P55283 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CDH4P55283 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC15.76■□□□□ 0.11
CDH4P55283 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CDH4P55283 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC15.76■□□□□ 0.11
CDH4P55283 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC15.76■□□□□ 0.11
CDH4P55283 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC15.76■□□□□ 0.11
CDH4P55283 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC15.76■□□□□ 0.11
CDH4P55283 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CDH4P55283 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CDH4P55283 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
CDH4P55283 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
CDH4P55283 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CDH4P55283 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CDH4P55283 MSTO2P-201ENST00000314835 1709 ntBASIC15.76■□□□□ 0.11
CDH4P55283 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC15.76■□□□□ 0.11
CDH4P55283 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CDH4P55283 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC15.76■□□□□ 0.11
CDH4P55283 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CDH4P55283 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC15.76■□□□□ 0.11
CDH4P55283 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CDH4P55283 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
CDH4P55283 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CDH4P55283 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC15.76■□□□□ 0.11
CDH4P55283 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CDH4P55283 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CDH4P55283 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CDH4P55283 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CDH4P55283 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC15.76■□□□□ 0.11
CDH4P55283 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC15.75■□□□□ 0.11
CDH4P55283 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC15.75■□□□□ 0.11
CDH4P55283 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
CDH4P55283 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CDH4P55283 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
CDH4P55283 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CDH4P55283 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CDH4P55283 AC148477.4-201ENST00000613430 1793 ntBASIC15.75■□□□□ 0.11
CDH4P55283 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CDH4P55283 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CDH4P55283 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
CDH4P55283 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC15.75■□□□□ 0.11
CDH4P55283 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CDH4P55283 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CDH4P55283 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CDH4P55283 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
CDH4P55283 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
CDH4P55283 RNU1-114P-201ENST00000365297 166 ntBASIC15.75■□□□□ 0.11
CDH4P55283 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC15.75■□□□□ 0.11
CDH4P55283 AL355864.2-201ENST00000447420 863 ntBASIC15.75■□□□□ 0.11
CDH4P55283 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC15.75■□□□□ 0.11
CDH4P55283 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC15.75■□□□□ 0.11
CDH4P55283 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC15.75■□□□□ 0.11
CDH4P55283 AL022328.1-201ENST00000610050 478 ntBASIC15.75■□□□□ 0.11
CDH4P55283 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC15.75■□□□□ 0.11
CDH4P55283 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CDH4P55283 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC15.75■□□□□ 0.11
CDH4P55283 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CDH4P55283 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
CDH4P55283 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CDH4P55283 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC15.75■□□□□ 0.11
CDH4P55283 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
CDH4P55283 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CDH4P55283 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC15.75■□□□□ 0.11
CDH4P55283 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CDH4P55283 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC15.75■□□□□ 0.11
CDH4P55283 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms