Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CPT1AP50416 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CPT1AP50416 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CPT1AP50416 AC104457.1-201ENST00000401024 814 ntBASIC16.98■□□□□ 0.31
CPT1AP50416 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC16.98■□□□□ 0.31
CPT1AP50416 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC16.98■□□□□ 0.31
CPT1AP50416 CHMP1AP1-201ENST00000445563 662 ntBASIC16.98■□□□□ 0.31
CPT1AP50416 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC16.98■□□□□ 0.31
CPT1AP50416 AP003171.2-201ENST00000528208 925 ntBASIC16.98■□□□□ 0.31
CPT1AP50416 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CPT1AP50416 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC16.98■□□□□ 0.31
CPT1AP50416 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC16.98■□□□□ 0.31
CPT1AP50416 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC16.98■□□□□ 0.31
CPT1AP50416 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CPT1AP50416 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC16.98■□□□□ 0.31
CPT1AP50416 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CPT1AP50416 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC16.98■□□□□ 0.31
CPT1AP50416 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
CPT1AP50416 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CPT1AP50416 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CPT1AP50416 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CPT1AP50416 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC16.98■□□□□ 0.31
CPT1AP50416 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC16.98■□□□□ 0.31
CPT1AP50416 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CPT1AP50416 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CPT1AP50416 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CPT1AP50416 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CPT1AP50416 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC16.97■□□□□ 0.31
CPT1AP50416 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
CPT1AP50416 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CPT1AP50416 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CPT1AP50416 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CPT1AP50416 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CPT1AP50416 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.97■□□□□ 0.31
CPT1AP50416 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC16.97■□□□□ 0.31
CPT1AP50416 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CPT1AP50416 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CPT1AP50416 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CPT1AP50416 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
CPT1AP50416 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CPT1AP50416 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
CPT1AP50416 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CPT1AP50416 SMS-201ENST00000379404 1174 ntTSL 3 BASIC16.97■□□□□ 0.31
CPT1AP50416 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CPT1AP50416 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
CPT1AP50416 AL354877.1-201ENST00000424412 413 ntBASIC16.97■□□□□ 0.31
CPT1AP50416 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC16.97■□□□□ 0.31
CPT1AP50416 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC16.97■□□□□ 0.31
CPT1AP50416 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC16.97■□□□□ 0.31
CPT1AP50416 AC044849.1-201ENST00000519737 1188 ntBASIC16.97■□□□□ 0.31
CPT1AP50416 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
CPT1AP50416 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
CPT1AP50416 COG4-212ENST00000564653 590 ntTSL 5 BASIC16.97■□□□□ 0.31
CPT1AP50416 DUX4L47-201ENST00000566374 394 ntBASIC16.97■□□□□ 0.31
CPT1AP50416 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC16.97■□□□□ 0.31
CPT1AP50416 MIR3619-201ENST00000579667 83 ntBASIC16.97■□□□□ 0.31
CPT1AP50416 AC138627.1-207ENST00000641560 1006 ntBASIC16.97■□□□□ 0.31
CPT1AP50416 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
CPT1AP50416 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CPT1AP50416 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
CPT1AP50416 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CPT1AP50416 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CPT1AP50416 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CPT1AP50416 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CPT1AP50416 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC16.97■□□□□ 0.31
CPT1AP50416 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CPT1AP50416 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC16.97■□□□□ 0.31
CPT1AP50416 WT1-209ENST00000530998 2421 ntTSL 2 BASIC16.97■□□□□ 0.31
CPT1AP50416 CES3-203ENST00000543856 3178 ntTSL 2 BASIC16.97■□□□□ 0.31
CPT1AP50416 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CPT1AP50416 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
CPT1AP50416 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CPT1AP50416 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC16.97■□□□□ 0.31
CPT1AP50416 CLUHP2-201ENST00000426660 1303 ntBASIC16.96■□□□□ 0.31
CPT1AP50416 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CPT1AP50416 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CPT1AP50416 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CPT1AP50416 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CPT1AP50416 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CPT1AP50416 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CPT1AP50416 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC16.96■□□□□ 0.31
CPT1AP50416 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC16.96■□□□□ 0.31
CPT1AP50416 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
CPT1AP50416 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CPT1AP50416 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC16.96■□□□□ 0.31
CPT1AP50416 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
CPT1AP50416 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CPT1AP50416 MIR769-201ENST00000390225 118 ntBASIC16.96■□□□□ 0.31
CPT1AP50416 ELK2AP-201ENST00000392510 1007 ntBASIC16.96■□□□□ 0.31
CPT1AP50416 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC16.96■□□□□ 0.31
CPT1AP50416 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CPT1AP50416 KRTAP19-9P-201ENST00000421795 191 ntBASIC16.96■□□□□ 0.31
CPT1AP50416 AL008707.1-201ENST00000422498 534 ntBASIC16.96■□□□□ 0.31
CPT1AP50416 AC016700.1-201ENST00000429424 312 ntBASIC16.96■□□□□ 0.31
CPT1AP50416 NKAIN1P1-201ENST00000435754 582 ntBASIC16.96■□□□□ 0.31
CPT1AP50416 UPF3AP2-201ENST00000457924 1132 ntBASIC16.96■□□□□ 0.31
CPT1AP50416 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC16.96■□□□□ 0.31
CPT1AP50416 MESTP3-201ENST00000503460 968 ntBASIC16.96■□□□□ 0.31
CPT1AP50416 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CPT1AP50416 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC16.96■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms