Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC13.57□□□□□ -0.24
GDNFP39905 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
GDNFP39905 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
GDNFP39905 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
GDNFP39905 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
GDNFP39905 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC13.57□□□□□ -0.24
GDNFP39905 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
GDNFP39905 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
GDNFP39905 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC13.57□□□□□ -0.24
GDNFP39905 AL928921.2-201ENST00000641325 2442 ntBASIC13.56□□□□□ -0.24
GDNFP39905 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
GDNFP39905 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC13.56□□□□□ -0.24
GDNFP39905 HSPA7-201ENST00000445535 1927 ntBASIC13.56□□□□□ -0.24
GDNFP39905 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
GDNFP39905 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
GDNFP39905 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC13.56□□□□□ -0.24
GDNFP39905 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC13.56□□□□□ -0.24
GDNFP39905 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC13.56□□□□□ -0.24
GDNFP39905 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
GDNFP39905 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC13.56□□□□□ -0.24
GDNFP39905 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
GDNFP39905 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
GDNFP39905 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
GDNFP39905 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
GDNFP39905 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
GDNFP39905 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
GDNFP39905 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
GDNFP39905 FABP5-202ENST00000396359 986 ntTSL 5 BASIC13.56□□□□□ -0.24
GDNFP39905 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC13.56□□□□□ -0.24
GDNFP39905 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
GDNFP39905 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
GDNFP39905 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC13.56□□□□□ -0.24
GDNFP39905 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
GDNFP39905 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
GDNFP39905 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC13.56□□□□□ -0.24
GDNFP39905 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
GDNFP39905 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC13.56□□□□□ -0.24
GDNFP39905 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
GDNFP39905 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC13.56□□□□□ -0.24
GDNFP39905 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC13.56□□□□□ -0.24
GDNFP39905 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC13.56□□□□□ -0.24
GDNFP39905 AL078644.1-201ENST00000609881 752 ntBASIC13.56□□□□□ -0.24
GDNFP39905 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
GDNFP39905 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
GDNFP39905 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
GDNFP39905 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
GDNFP39905 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC13.56□□□□□ -0.24
GDNFP39905 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC13.56□□□□□ -0.24
GDNFP39905 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
GDNFP39905 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC13.56□□□□□ -0.24
GDNFP39905 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
GDNFP39905 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC13.56□□□□□ -0.24
GDNFP39905 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC13.56□□□□□ -0.24
GDNFP39905 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
GDNFP39905 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC13.56□□□□□ -0.24
GDNFP39905 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
GDNFP39905 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
GDNFP39905 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
GDNFP39905 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
GDNFP39905 SRC-202ENST00000373558 4304 ntTSL 5 BASIC13.55□□□□□ -0.24
GDNFP39905 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
GDNFP39905 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
GDNFP39905 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
GDNFP39905 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
GDNFP39905 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
GDNFP39905 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
GDNFP39905 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
GDNFP39905 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
GDNFP39905 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
GDNFP39905 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
GDNFP39905 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
GDNFP39905 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
GDNFP39905 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC13.55□□□□□ -0.24
GDNFP39905 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
GDNFP39905 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
GDNFP39905 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
GDNFP39905 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC13.55□□□□□ -0.24
GDNFP39905 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC13.55□□□□□ -0.24
GDNFP39905 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
GDNFP39905 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
GDNFP39905 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
GDNFP39905 IMP4-203ENST00000409935 958 ntTSL 5 BASIC13.55□□□□□ -0.24
GDNFP39905 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC13.55□□□□□ -0.24
GDNFP39905 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
GDNFP39905 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC13.55□□□□□ -0.24
GDNFP39905 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC13.55□□□□□ -0.24
GDNFP39905 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
GDNFP39905 AC040169.1-201ENST00000565382 521 ntBASIC13.55□□□□□ -0.24
GDNFP39905 MIR4313-201ENST00000580760 101 ntBASIC13.55□□□□□ -0.24
GDNFP39905 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC13.55□□□□□ -0.24
GDNFP39905 AC091812.2-201ENST00000619081 385 ntBASIC13.55□□□□□ -0.24
GDNFP39905 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC13.55□□□□□ -0.24
GDNFP39905 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC13.55□□□□□ -0.24
GDNFP39905 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
GDNFP39905 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
GDNFP39905 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
GDNFP39905 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC13.55□□□□□ -0.24
GDNFP39905 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC13.55□□□□□ -0.24
GDNFP39905 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
GDNFP39905 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 86 ms