Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC13.8□□□□□ -0.2
HOXC12P31275 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC13.8□□□□□ -0.2
HOXC12P31275 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
HOXC12P31275 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
HOXC12P31275 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC13.8□□□□□ -0.2
HOXC12P31275 LINC01115-203ENST00000606068 577 ntBASIC13.8□□□□□ -0.2
HOXC12P31275 AC133552.6-201ENST00000613406 534 ntBASIC13.8□□□□□ -0.2
HOXC12P31275 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC13.8□□□□□ -0.2
HOXC12P31275 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
HOXC12P31275 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
HOXC12P31275 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
HOXC12P31275 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
HOXC12P31275 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC13.8□□□□□ -0.2
HOXC12P31275 MYO16-203ENST00000357550 6779 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
HOXC12P31275 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
HOXC12P31275 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
HOXC12P31275 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
HOXC12P31275 FLII-221ENST00000578558 2377 ntTSL 5 BASIC13.8□□□□□ -0.2
HOXC12P31275 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
HOXC12P31275 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HOXC12P31275 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HOXC12P31275 TSPY26P-202ENST00000565928 3884 ntBASIC13.8□□□□□ -0.2
HOXC12P31275 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
HOXC12P31275 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
HOXC12P31275 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
HOXC12P31275 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC13.8□□□□□ -0.2
HOXC12P31275 AL133338.1-201ENST00000565695 1517 ntBASIC13.8□□□□□ -0.2
HOXC12P31275 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC13.8□□□□□ -0.2
HOXC12P31275 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC13.79□□□□□ -0.2
HOXC12P31275 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
HOXC12P31275 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC13.79□□□□□ -0.2
HOXC12P31275 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
HOXC12P31275 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC13.79□□□□□ -0.2
HOXC12P31275 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
HOXC12P31275 PRAL-201ENST00000624952 3286 ntBASIC13.79□□□□□ -0.2
HOXC12P31275 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
HOXC12P31275 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC13.79□□□□□ -0.2
HOXC12P31275 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
HOXC12P31275 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC13.79□□□□□ -0.2
HOXC12P31275 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
HOXC12P31275 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
HOXC12P31275 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC13.79□□□□□ -0.2
HOXC12P31275 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
HOXC12P31275 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
HOXC12P31275 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC13.79□□□□□ -0.2
HOXC12P31275 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
HOXC12P31275 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
HOXC12P31275 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
HOXC12P31275 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
HOXC12P31275 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC13.79□□□□□ -0.2
HOXC12P31275 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
HOXC12P31275 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
HOXC12P31275 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
HOXC12P31275 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
HOXC12P31275 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
HOXC12P31275 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
HOXC12P31275 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
HOXC12P31275 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
HOXC12P31275 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC13.79□□□□□ -0.2
HOXC12P31275 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
HOXC12P31275 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC13.79□□□□□ -0.2
HOXC12P31275 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC13.79□□□□□ -0.2
HOXC12P31275 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC13.79□□□□□ -0.2
HOXC12P31275 FTH1-202ENST00000526640 786 ntTSL 2 BASIC13.79□□□□□ -0.2
HOXC12P31275 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC13.79□□□□□ -0.2
HOXC12P31275 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC13.79□□□□□ -0.2
HOXC12P31275 RRP7BP-205ENST00000566851 833 ntBASIC13.79□□□□□ -0.2
HOXC12P31275 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC13.79□□□□□ -0.2
HOXC12P31275 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC13.79□□□□□ -0.2
HOXC12P31275 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC13.79□□□□□ -0.2
HOXC12P31275 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
HOXC12P31275 MIR6775-201ENST00000617557 69 ntBASIC13.79□□□□□ -0.2
HOXC12P31275 PFAS-212ENST00000625942 396 ntTSL 5 BASIC13.79□□□□□ -0.2
HOXC12P31275 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
HOXC12P31275 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
HOXC12P31275 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
HOXC12P31275 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC13.79□□□□□ -0.2
HOXC12P31275 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC13.79□□□□□ -0.2
HOXC12P31275 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
HOXC12P31275 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
HOXC12P31275 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC13.79□□□□□ -0.2
HOXC12P31275 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
HOXC12P31275 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
HOXC12P31275 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC13.79□□□□□ -0.2
HOXC12P31275 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
HOXC12P31275 C1R-202ENST00000536053 2347 ntTSL 2 BASIC13.79□□□□□ -0.2
HOXC12P31275 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
HOXC12P31275 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC13.79□□□□□ -0.2
HOXC12P31275 AL607033.1-201ENST00000623900 1599 ntBASIC13.79□□□□□ -0.2
HOXC12P31275 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC13.79□□□□□ -0.2
HOXC12P31275 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC13.79□□□□□ -0.2
HOXC12P31275 SUPT20HL2-201ENST00000486479 2409 ntBASIC13.79□□□□□ -0.2
HOXC12P31275 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC13.79□□□□□ -0.2
HOXC12P31275 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
HOXC12P31275 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC13.79□□□□□ -0.2
HOXC12P31275 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC13.79□□□□□ -0.2
HOXC12P31275 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC13.79□□□□□ -0.2
HOXC12P31275 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
HOXC12P31275 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC13.78□□□□□ -0.2
HOXC12P31275 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms