Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 AC026740.1-201ENST00000607068 791 ntBASIC16.6■□□□□ 0.25
HOXC8P31273 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC16.6■□□□□ 0.25
HOXC8P31273 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HOXC8P31273 PCBP2-OT1-201ENST00000634357 590 ntBASIC16.6■□□□□ 0.25
HOXC8P31273 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC16.6■□□□□ 0.25
HOXC8P31273 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HOXC8P31273 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
HOXC8P31273 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HOXC8P31273 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC16.6■□□□□ 0.25
HOXC8P31273 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
HOXC8P31273 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC16.6■□□□□ 0.25
HOXC8P31273 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
HOXC8P31273 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
HOXC8P31273 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HOXC8P31273 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HOXC8P31273 PES1-204ENST00000402284 2144 ntTSL 5 BASIC16.6■□□□□ 0.25
HOXC8P31273 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HOXC8P31273 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HOXC8P31273 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HOXC8P31273 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC16.59■□□□□ 0.25
HOXC8P31273 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HOXC8P31273 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC16.59■□□□□ 0.25
HOXC8P31273 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
HOXC8P31273 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC16.59■□□□□ 0.25
HOXC8P31273 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HOXC8P31273 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
HOXC8P31273 AC092850.2-201ENST00000623821 2697 ntBASIC16.59■□□□□ 0.25
HOXC8P31273 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HOXC8P31273 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
HOXC8P31273 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
HOXC8P31273 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC16.59■□□□□ 0.25
HOXC8P31273 AC021723.1-201ENST00000486306 515 ntBASIC16.59■□□□□ 0.25
HOXC8P31273 HNRNPA1P36-201ENST00000521313 955 ntBASIC16.59■□□□□ 0.25
HOXC8P31273 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC16.59■□□□□ 0.25
HOXC8P31273 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC16.59■□□□□ 0.25
HOXC8P31273 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC16.59■□□□□ 0.25
HOXC8P31273 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
HOXC8P31273 DUX4L46-201ENST00000566845 751 ntBASIC16.59■□□□□ 0.25
HOXC8P31273 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HOXC8P31273 RN7SL574P-201ENST00000581512 297 ntBASIC16.59■□□□□ 0.25
HOXC8P31273 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HOXC8P31273 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC16.59■□□□□ 0.25
HOXC8P31273 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
HOXC8P31273 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
HOXC8P31273 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HOXC8P31273 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
HOXC8P31273 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC16.59■□□□□ 0.25
HOXC8P31273 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HOXC8P31273 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HOXC8P31273 AC084018.2-201ENST00000613093 2607 ntBASIC16.59■□□□□ 0.25
HOXC8P31273 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HOXC8P31273 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HOXC8P31273 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
HOXC8P31273 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC16.59■□□□□ 0.25
HOXC8P31273 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
HOXC8P31273 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
HOXC8P31273 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HOXC8P31273 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
HOXC8P31273 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
HOXC8P31273 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
HOXC8P31273 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
HOXC8P31273 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC16.58■□□□□ 0.25
HOXC8P31273 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC16.58■□□□□ 0.25
HOXC8P31273 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
HOXC8P31273 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
HOXC8P31273 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.25
HOXC8P31273 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
HOXC8P31273 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC16.58■□□□□ 0.24
HOXC8P31273 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
HOXC8P31273 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
HOXC8P31273 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC16.58■□□□□ 0.24
HOXC8P31273 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC16.58■□□□□ 0.24
HOXC8P31273 AK6-201ENST00000380818 1183 ntTSL 2 BASIC16.58■□□□□ 0.24
HOXC8P31273 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HOXC8P31273 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HOXC8P31273 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC16.58■□□□□ 0.24
HOXC8P31273 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
HOXC8P31273 EID1-202ENST00000560490 584 ntTSL 3 BASIC16.58■□□□□ 0.24
HOXC8P31273 SYT17-208ENST00000568433 812 ntTSL 3 BASIC16.58■□□□□ 0.24
HOXC8P31273 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HOXC8P31273 RN7SL163P-201ENST00000583100 276 ntBASIC16.58■□□□□ 0.24
HOXC8P31273 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
HOXC8P31273 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HOXC8P31273 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HOXC8P31273 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
HOXC8P31273 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC16.58■□□□□ 0.24
HOXC8P31273 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HOXC8P31273 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HOXC8P31273 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC16.58■□□□□ 0.24
HOXC8P31273 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
HOXC8P31273 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HOXC8P31273 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HOXC8P31273 API5-202ENST00000420461 2009 ntTSL 2 BASIC16.58■□□□□ 0.24
HOXC8P31273 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HOXC8P31273 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC16.58■□□□□ 0.24
HOXC8P31273 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
HOXC8P31273 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HOXC8P31273 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HOXC8P31273 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
HOXC8P31273 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms