Protein–RNA interactions for Protein: P22736

NR4A1, Nuclear receptor subfamily 4 group A member 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1P22736 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC14.5□□□□□ -0.09
NR4A1P22736 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC14.5□□□□□ -0.09
NR4A1P22736 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC14.5□□□□□ -0.09
NR4A1P22736 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
NR4A1P22736 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
NR4A1P22736 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC14.5□□□□□ -0.09
NR4A1P22736 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
NR4A1P22736 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
NR4A1P22736 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
NR4A1P22736 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
NR4A1P22736 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
NR4A1P22736 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
NR4A1P22736 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
NR4A1P22736 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
NR4A1P22736 CICP8-201ENST00000455800 2813 ntBASIC14.5□□□□□ -0.09
NR4A1P22736 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
NR4A1P22736 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
NR4A1P22736 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
NR4A1P22736 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
NR4A1P22736 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
NR4A1P22736 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
NR4A1P22736 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
NR4A1P22736 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
NR4A1P22736 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC14.49□□□□□ -0.09
NR4A1P22736 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC14.49□□□□□ -0.09
NR4A1P22736 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NR4A1P22736 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
NR4A1P22736 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NR4A1P22736 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NR4A1P22736 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NR4A1P22736 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NR4A1P22736 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
NR4A1P22736 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC14.49□□□□□ -0.09
NR4A1P22736 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
NR4A1P22736 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC14.49□□□□□ -0.09
NR4A1P22736 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NR4A1P22736 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC14.49□□□□□ -0.09
NR4A1P22736 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
NR4A1P22736 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NR4A1P22736 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NR4A1P22736 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
NR4A1P22736 HTR5BP-201ENST00000430851 1154 ntBASIC14.49□□□□□ -0.09
NR4A1P22736 AC140658.5-201ENST00000438532 169 ntBASIC14.49□□□□□ -0.09
NR4A1P22736 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
NR4A1P22736 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC14.49□□□□□ -0.09
NR4A1P22736 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC14.49□□□□□ -0.09
NR4A1P22736 AC112191.1-201ENST00000523689 701 ntBASIC14.49□□□□□ -0.09
NR4A1P22736 THTPA-204ENST00000554970 569 ntTSL 4 BASIC14.49□□□□□ -0.09
NR4A1P22736 THTPA-206ENST00000556015 535 ntTSL 3 BASIC14.49□□□□□ -0.09
NR4A1P22736 USP31-203ENST00000567975 2142 ntTSL 2 BASIC14.49□□□□□ -0.09
NR4A1P22736 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
NR4A1P22736 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
NR4A1P22736 AC006538.3-201ENST00000612495 578 ntBASIC14.49□□□□□ -0.09
NR4A1P22736 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
NR4A1P22736 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC14.49□□□□□ -0.09
NR4A1P22736 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC14.49□□□□□ -0.09
NR4A1P22736 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NR4A1P22736 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
NR4A1P22736 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NR4A1P22736 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
NR4A1P22736 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
NR4A1P22736 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
NR4A1P22736 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC14.49□□□□□ -0.09
NR4A1P22736 AC027601.5-201ENST00000624065 2482 ntBASIC14.49□□□□□ -0.09
NR4A1P22736 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC14.49□□□□□ -0.09
NR4A1P22736 ARHGAP23P1-201ENST00000562773 1937 ntBASIC14.49□□□□□ -0.09
NR4A1P22736 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC14.49□□□□□ -0.09
NR4A1P22736 AL928921.2-201ENST00000641325 2442 ntBASIC14.49□□□□□ -0.09
NR4A1P22736 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC14.48□□□□□ -0.09
NR4A1P22736 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NR4A1P22736 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
NR4A1P22736 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
NR4A1P22736 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
NR4A1P22736 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NR4A1P22736 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
NR4A1P22736 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC14.48□□□□□ -0.09
NR4A1P22736 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC14.48□□□□□ -0.09
NR4A1P22736 MROH4P-201ENST00000431302 1578 ntBASIC14.48□□□□□ -0.09
NR4A1P22736 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
NR4A1P22736 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC14.48□□□□□ -0.09
NR4A1P22736 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
NR4A1P22736 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
NR4A1P22736 AC148477.4-201ENST00000613430 1793 ntBASIC14.48□□□□□ -0.09
NR4A1P22736 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC14.48□□□□□ -0.09
NR4A1P22736 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NR4A1P22736 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC14.48□□□□□ -0.09
NR4A1P22736 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NR4A1P22736 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NR4A1P22736 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
NR4A1P22736 AC002056.1-201ENST00000395613 760 ntBASIC14.48□□□□□ -0.09
NR4A1P22736 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
NR4A1P22736 FAM58CP-201ENST00000435741 640 ntBASIC14.48□□□□□ -0.09
NR4A1P22736 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
NR4A1P22736 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC14.48□□□□□ -0.09
NR4A1P22736 MTRF1LP2-201ENST00000506027 1122 ntBASIC14.48□□□□□ -0.09
NR4A1P22736 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC14.48□□□□□ -0.09
NR4A1P22736 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC14.48□□□□□ -0.09
NR4A1P22736 DHDH-204ENST00000523250 634 ntTSL 5 BASIC14.48□□□□□ -0.09
NR4A1P22736 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC14.48□□□□□ -0.09
NR4A1P22736 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms