Protein–RNA interactions for Protein: P19256

CD58, Lymphocyte function-associated antigen 3, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD58P19256 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CD58P19256 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC16.64■□□□□ 0.25
CD58P19256 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
CD58P19256 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC16.64■□□□□ 0.25
CD58P19256 RN7SL399P-201ENST00000471648 279 ntBASIC16.64■□□□□ 0.25
CD58P19256 AC025181.2-201ENST00000606994 802 ntBASIC16.64■□□□□ 0.25
CD58P19256 HADH-212ENST00000638621 741 ntTSL 5 BASIC16.64■□□□□ 0.25
CD58P19256 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
CD58P19256 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CD58P19256 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC16.64■□□□□ 0.25
CD58P19256 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC16.64■□□□□ 0.25
CD58P19256 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CD58P19256 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC16.64■□□□□ 0.25
CD58P19256 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
CD58P19256 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC16.63■□□□□ 0.25
CD58P19256 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC16.63■□□□□ 0.25
CD58P19256 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC16.63■□□□□ 0.25
CD58P19256 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CD58P19256 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CD58P19256 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
CD58P19256 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
CD58P19256 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC16.63■□□□□ 0.25
CD58P19256 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CD58P19256 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CD58P19256 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC16.63■□□□□ 0.25
CD58P19256 MST1L-201ENST00000442552 2185 ntBASIC16.63■□□□□ 0.25
CD58P19256 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC16.63■□□□□ 0.25
CD58P19256 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CD58P19256 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC16.63■□□□□ 0.25
CD58P19256 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CD58P19256 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC16.63■□□□□ 0.25
CD58P19256 PIN1P1-201ENST00000412108 996 ntBASIC16.63■□□□□ 0.25
CD58P19256 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
CD58P19256 RHOA-206ENST00000454011 889 ntTSL 2 BASIC16.63■□□□□ 0.25
CD58P19256 FADS2-205ENST00000517839 469 ntTSL 3 BASIC16.63■□□□□ 0.25
CD58P19256 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC16.63■□□□□ 0.25
CD58P19256 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC16.63■□□□□ 0.25
CD58P19256 API5-211ENST00000534695 560 ntTSL 5 BASIC16.63■□□□□ 0.25
CD58P19256 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC16.63■□□□□ 0.25
CD58P19256 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC16.63■□□□□ 0.25
CD58P19256 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC16.63■□□□□ 0.25
CD58P19256 AC138761.1-201ENST00000584393 385 ntBASIC16.63■□□□□ 0.25
CD58P19256 TBCB-211ENST00000589996 724 ntTSL 3 BASIC16.63■□□□□ 0.25
CD58P19256 AC000095.1-201ENST00000603208 874 ntBASIC16.63■□□□□ 0.25
CD58P19256 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC16.63■□□□□ 0.25
CD58P19256 AC007431.3-201ENST00000623221 587 ntBASIC16.63■□□□□ 0.25
CD58P19256 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC16.63■□□□□ 0.25
CD58P19256 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CD58P19256 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CD58P19256 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CD58P19256 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
CD58P19256 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CD58P19256 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CD58P19256 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC16.63■□□□□ 0.25
CD58P19256 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC16.63■□□□□ 0.25
CD58P19256 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CD58P19256 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC16.63■□□□□ 0.25
CD58P19256 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CD58P19256 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
CD58P19256 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CD58P19256 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC16.63■□□□□ 0.25
CD58P19256 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC16.63■□□□□ 0.25
CD58P19256 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
CD58P19256 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
CD58P19256 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CD58P19256 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CD58P19256 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
CD58P19256 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CD58P19256 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CD58P19256 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CD58P19256 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CD58P19256 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CD58P19256 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC16.62■□□□□ 0.25
CD58P19256 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CD58P19256 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CD58P19256 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CD58P19256 AC023157.3-201ENST00000619086 2088 ntBASIC16.62■□□□□ 0.25
CD58P19256 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC16.62■□□□□ 0.25
CD58P19256 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
CD58P19256 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
CD58P19256 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC16.62■□□□□ 0.25
CD58P19256 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CD58P19256 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CD58P19256 CALY-202ENST00000368555 783 ntTSL 2 BASIC16.62■□□□□ 0.25
CD58P19256 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC16.62■□□□□ 0.25
CD58P19256 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
CD58P19256 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CD58P19256 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CD58P19256 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC16.62■□□□□ 0.25
CD58P19256 AC098850.1-201ENST00000419919 790 ntBASIC16.62■□□□□ 0.25
CD58P19256 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC16.62■□□□□ 0.25
CD58P19256 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CD58P19256 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC16.62■□□□□ 0.25
CD58P19256 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC16.62■□□□□ 0.25
CD58P19256 AC123567.1-201ENST00000548294 1261 ntBASIC16.62■□□□□ 0.25
CD58P19256 AL109954.1-202ENST00000564051 2148 ntBASIC16.62■□□□□ 0.25
CD58P19256 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC16.62■□□□□ 0.25
CD58P19256 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
CD58P19256 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC16.62■□□□□ 0.25
CD58P19256 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms