Protein–RNA interactions for Protein: P11230

CHRNB1, Acetylcholine receptor subunit beta, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1P11230 AC006449.6-201ENST00000612330 2296 ntBASIC15.67■□□□□ 0.1
CHRNB1P11230 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC15.67■□□□□ 0.1
CHRNB1P11230 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CHRNB1P11230 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CHRNB1P11230 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC15.67■□□□□ 0.1
CHRNB1P11230 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CHRNB1P11230 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CHRNB1P11230 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
CHRNB1P11230 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CHRNB1P11230 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CHRNB1P11230 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CHRNB1P11230 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CHRNB1P11230 AC148477.4-201ENST00000613430 1793 ntBASIC15.67■□□□□ 0.1
CHRNB1P11230 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
CHRNB1P11230 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CHRNB1P11230 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CHRNB1P11230 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CHRNB1P11230 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
CHRNB1P11230 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CHRNB1P11230 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC15.66■□□□□ 0.1
CHRNB1P11230 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CHRNB1P11230 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CHRNB1P11230 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC15.66■□□□□ 0.1
CHRNB1P11230 AL023775.1-201ENST00000454907 1746 ntBASIC15.66■□□□□ 0.1
CHRNB1P11230 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CHRNB1P11230 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
CHRNB1P11230 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
CHRNB1P11230 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CHRNB1P11230 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
CHRNB1P11230 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC15.66■□□□□ 0.1
CHRNB1P11230 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CHRNB1P11230 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC15.66■□□□□ 0.1
CHRNB1P11230 MIR648-201ENST00000385046 94 ntBASIC15.66■□□□□ 0.1
CHRNB1P11230 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC15.66■□□□□ 0.1
CHRNB1P11230 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC15.66■□□□□ 0.1
CHRNB1P11230 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CHRNB1P11230 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CHRNB1P11230 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC15.66■□□□□ 0.1
CHRNB1P11230 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC15.66■□□□□ 0.1
CHRNB1P11230 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC15.66■□□□□ 0.1
CHRNB1P11230 EHF-205ENST00000527935 557 ntTSL 2 BASIC15.66■□□□□ 0.1
CHRNB1P11230 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
CHRNB1P11230 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CHRNB1P11230 CHMP4BP1-201ENST00000556017 588 ntBASIC15.66■□□□□ 0.1
CHRNB1P11230 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CHRNB1P11230 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC15.66■□□□□ 0.1
CHRNB1P11230 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC15.66■□□□□ 0.1
CHRNB1P11230 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
CHRNB1P11230 GPR39-203ENST00000622084 900 ntTSL 5 BASIC15.66■□□□□ 0.1
CHRNB1P11230 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC15.66■□□□□ 0.1
CHRNB1P11230 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC15.66■□□□□ 0.1
CHRNB1P11230 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC15.66■□□□□ 0.1
CHRNB1P11230 AC138627.1-207ENST00000641560 1006 ntBASIC15.66■□□□□ 0.1
CHRNB1P11230 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC15.66■□□□□ 0.1
CHRNB1P11230 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CHRNB1P11230 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CHRNB1P11230 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC15.66■□□□□ 0.1
CHRNB1P11230 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
CHRNB1P11230 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC15.66■□□□□ 0.1
CHRNB1P11230 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CHRNB1P11230 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CHRNB1P11230 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC15.66■□□□□ 0.1
CHRNB1P11230 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC15.66■□□□□ 0.1
CHRNB1P11230 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
CHRNB1P11230 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CHRNB1P11230 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CHRNB1P11230 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CHRNB1P11230 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CHRNB1P11230 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC15.65■□□□□ 0.1
CHRNB1P11230 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
CHRNB1P11230 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CHRNB1P11230 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CHRNB1P11230 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC15.65■□□□□ 0.1
CHRNB1P11230 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CHRNB1P11230 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
CHRNB1P11230 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CHRNB1P11230 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CHRNB1P11230 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
CHRNB1P11230 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CHRNB1P11230 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CHRNB1P11230 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC15.65■□□□□ 0.1
CHRNB1P11230 NUS1P3-201ENST00000423502 862 ntBASIC15.65■□□□□ 0.1
CHRNB1P11230 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC15.65■□□□□ 0.1
CHRNB1P11230 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC15.65■□□□□ 0.1
CHRNB1P11230 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC15.65■□□□□ 0.1
CHRNB1P11230 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC15.65■□□□□ 0.1
CHRNB1P11230 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC15.65■□□□□ 0.1
CHRNB1P11230 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC15.65■□□□□ 0.1
CHRNB1P11230 RN7SL769P-201ENST00000469386 295 ntBASIC15.65■□□□□ 0.1
CHRNB1P11230 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC15.65■□□□□ 0.1
CHRNB1P11230 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC15.65■□□□□ 0.1
CHRNB1P11230 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC15.65■□□□□ 0.1
CHRNB1P11230 NDUFV2P1-201ENST00000596415 907 ntBASIC15.65■□□□□ 0.1
CHRNB1P11230 PRSS30P-206ENST00000641773 873 ntBASIC15.65■□□□□ 0.1
CHRNB1P11230 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CHRNB1P11230 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CHRNB1P11230 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
CHRNB1P11230 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
CHRNB1P11230 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC15.65■□□□□ 0.1
CHRNB1P11230 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms