Protein–RNA interactions for Protein: P10909

CLU, Clusterin, humanhuman

Predictions only

Length 449 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLUP10909 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC14.04□□□□□ -0.16
CLUP10909 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CLUP10909 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLUP10909 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
CLUP10909 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC14.04□□□□□ -0.16
CLUP10909 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CLUP10909 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
CLUP10909 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC14.04□□□□□ -0.16
CLUP10909 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC14.04□□□□□ -0.16
CLUP10909 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLUP10909 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC14.04□□□□□ -0.16
CLUP10909 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLUP10909 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLUP10909 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC14.03□□□□□ -0.16
CLUP10909 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CLUP10909 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLUP10909 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLUP10909 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CLUP10909 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
CLUP10909 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC14.03□□□□□ -0.16
CLUP10909 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC14.03□□□□□ -0.16
CLUP10909 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
CLUP10909 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC14.03□□□□□ -0.16
CLUP10909 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLUP10909 CD82-202ENST00000342935 967 ntTSL 5 BASIC14.03□□□□□ -0.16
CLUP10909 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLUP10909 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLUP10909 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLUP10909 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
CLUP10909 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLUP10909 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC14.03□□□□□ -0.16
CLUP10909 PGAM5P1-201ENST00000518923 814 ntBASIC14.03□□□□□ -0.16
CLUP10909 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC14.03□□□□□ -0.16
CLUP10909 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC14.03□□□□□ -0.16
CLUP10909 BANF1P1-201ENST00000553684 263 ntBASIC14.03□□□□□ -0.16
CLUP10909 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC14.03□□□□□ -0.16
CLUP10909 C20orf181-201ENST00000623918 480 ntBASIC14.03□□□□□ -0.16
CLUP10909 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC14.03□□□□□ -0.16
CLUP10909 AC084121.4-201ENST00000641598 221 ntBASIC14.03□□□□□ -0.16
CLUP10909 AF228730.8-201ENST00000642140 221 ntBASIC14.03□□□□□ -0.16
CLUP10909 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLUP10909 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLUP10909 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
CLUP10909 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
CLUP10909 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLUP10909 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLUP10909 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLUP10909 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLUP10909 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC14.03□□□□□ -0.16
CLUP10909 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
CLUP10909 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLUP10909 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC14.03□□□□□ -0.16
CLUP10909 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC14.03□□□□□ -0.16
CLUP10909 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC14.03□□□□□ -0.16
CLUP10909 ZBED1P1-201ENST00000502364 1930 ntBASIC14.03□□□□□ -0.16
CLUP10909 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
CLUP10909 AC232323.1-201ENST00000540724 2099 ntBASIC14.03□□□□□ -0.16
CLUP10909 REXO1L5P-201ENST00000622260 2098 ntBASIC14.03□□□□□ -0.16
CLUP10909 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLUP10909 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CLUP10909 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC14.03□□□□□ -0.16
CLUP10909 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLUP10909 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLUP10909 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLUP10909 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLUP10909 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CLUP10909 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
CLUP10909 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
CLUP10909 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
CLUP10909 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
CLUP10909 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CLUP10909 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CLUP10909 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
CLUP10909 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CLUP10909 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CLUP10909 AL390755.1-201ENST00000623716 2027 ntBASIC14.02□□□□□ -0.16
CLUP10909 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC14.02□□□□□ -0.16
CLUP10909 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CLUP10909 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
CLUP10909 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CLUP10909 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CLUP10909 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CLUP10909 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC14.02□□□□□ -0.16
CLUP10909 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
CLUP10909 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
CLUP10909 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC14.02□□□□□ -0.16
CLUP10909 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CLUP10909 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
CLUP10909 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC14.02□□□□□ -0.17
CLUP10909 FXR1-221ENST00000491674 365 ntTSL 2 BASIC14.02□□□□□ -0.17
CLUP10909 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC14.02□□□□□ -0.17
CLUP10909 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CLUP10909 POLD2P1-201ENST00000511220 997 ntBASIC14.02□□□□□ -0.17
CLUP10909 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC14.02□□□□□ -0.17
CLUP10909 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC14.02□□□□□ -0.17
CLUP10909 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CLUP10909 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
CLUP10909 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CLUP10909 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CLUP10909 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms