Protein–RNA interactions for Protein: P09455

RBP1, Retinol-binding protein 1, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBP1P09455 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RBP1P09455 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC15.31■□□□□ 0.04
RBP1P09455 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RBP1P09455 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC15.31■□□□□ 0.04
RBP1P09455 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
RBP1P09455 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RBP1P09455 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RBP1P09455 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC15.31■□□□□ 0.04
RBP1P09455 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC15.31■□□□□ 0.04
RBP1P09455 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RBP1P09455 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC15.31■□□□□ 0.04
RBP1P09455 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RBP1P09455 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RBP1P09455 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC15.31■□□□□ 0.04
RBP1P09455 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
RBP1P09455 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
RBP1P09455 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RBP1P09455 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RBP1P09455 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
RBP1P09455 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RBP1P09455 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RBP1P09455 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RBP1P09455 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
RBP1P09455 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RBP1P09455 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RBP1P09455 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
RBP1P09455 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
RBP1P09455 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RBP1P09455 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RBP1P09455 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RBP1P09455 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RBP1P09455 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RBP1P09455 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RBP1P09455 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RBP1P09455 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RBP1P09455 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RBP1P09455 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
RBP1P09455 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RBP1P09455 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC15.3■□□□□ 0.04
RBP1P09455 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC15.3■□□□□ 0.04
RBP1P09455 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC15.3■□□□□ 0.04
RBP1P09455 AC074338.1-201ENST00000416825 156 ntBASIC15.3■□□□□ 0.04
RBP1P09455 ACE3P-201ENST00000423435 1973 ntBASIC15.3■□□□□ 0.04
RBP1P09455 REXO1L2P-201ENST00000425429 2069 ntBASIC15.3■□□□□ 0.04
RBP1P09455 COX10-202ENST00000429152 875 ntTSL 2 BASIC15.3■□□□□ 0.04
RBP1P09455 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC15.3■□□□□ 0.04
RBP1P09455 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RBP1P09455 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC15.3■□□□□ 0.04
RBP1P09455 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC15.3■□□□□ 0.04
RBP1P09455 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC15.3■□□□□ 0.04
RBP1P09455 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
RBP1P09455 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC15.3■□□□□ 0.04
RBP1P09455 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
RBP1P09455 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC15.3■□□□□ 0.04
RBP1P09455 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC15.3■□□□□ 0.04
RBP1P09455 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC15.3■□□□□ 0.04
RBP1P09455 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC15.3■□□□□ 0.04
RBP1P09455 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC15.3■□□□□ 0.04
RBP1P09455 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC15.3■□□□□ 0.04
RBP1P09455 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RBP1P09455 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC15.3■□□□□ 0.04
RBP1P09455 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RBP1P09455 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC15.3■□□□□ 0.04
RBP1P09455 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC15.3■□□□□ 0.04
RBP1P09455 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
RBP1P09455 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
RBP1P09455 GRAMD4P3-201ENST00000621665 1669 ntBASIC15.3■□□□□ 0.04
RBP1P09455 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC15.3■□□□□ 0.04
RBP1P09455 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC15.3■□□□□ 0.04
RBP1P09455 AL645728.2-202ENST00000641679 227 ntBASIC15.3■□□□□ 0.04
RBP1P09455 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RBP1P09455 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RBP1P09455 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
RBP1P09455 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC15.3■□□□□ 0.04
RBP1P09455 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
RBP1P09455 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
RBP1P09455 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
RBP1P09455 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RBP1P09455 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RBP1P09455 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
RBP1P09455 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
RBP1P09455 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RBP1P09455 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RBP1P09455 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RBP1P09455 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RBP1P09455 DEK-201ENST00000244776 1441 ntTSL 2 BASIC15.29■□□□□ 0.04
RBP1P09455 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RBP1P09455 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RBP1P09455 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RBP1P09455 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RBP1P09455 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RBP1P09455 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC15.29■□□□□ 0.04
RBP1P09455 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC15.29■□□□□ 0.04
RBP1P09455 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC15.29■□□□□ 0.04
RBP1P09455 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC15.29■□□□□ 0.04
RBP1P09455 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RBP1P09455 AL033527.5-202ENST00000641632 1098 ntBASIC15.29■□□□□ 0.04
RBP1P09455 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC15.29■□□□□ 0.04
RBP1P09455 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RBP1P09455 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 127.6 ms