Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
HLA-DQB2P05538 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
HLA-DQB2P05538 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
HLA-DQB2P05538 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
HLA-DQB2P05538 AMT-232ENST00000636199 1546 ntTSL 5 BASIC15.68■□□□□ 0.1
HLA-DQB2P05538 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HLA-DQB2P05538 LINC00528-201ENST00000600723 2160 ntBASIC15.68■□□□□ 0.1
HLA-DQB2P05538 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HLA-DQB2P05538 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HLA-DQB2P05538 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC15.67■□□□□ 0.1
HLA-DQB2P05538 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
HLA-DQB2P05538 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
HLA-DQB2P05538 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HLA-DQB2P05538 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC15.67■□□□□ 0.1
HLA-DQB2P05538 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HLA-DQB2P05538 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
HLA-DQB2P05538 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC15.67■□□□□ 0.1
HLA-DQB2P05538 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC15.67■□□□□ 0.1
HLA-DQB2P05538 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
HLA-DQB2P05538 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
HLA-DQB2P05538 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC15.67■□□□□ 0.1
HLA-DQB2P05538 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HLA-DQB2P05538 AL391825.1-201ENST00000457671 1364 ntBASIC15.67■□□□□ 0.1
HLA-DQB2P05538 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
HLA-DQB2P05538 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HLA-DQB2P05538 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
HLA-DQB2P05538 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC15.67■□□□□ 0.1
HLA-DQB2P05538 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
HLA-DQB2P05538 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HLA-DQB2P05538 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC15.67■□□□□ 0.1
HLA-DQB2P05538 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HLA-DQB2P05538 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC15.67■□□□□ 0.1
HLA-DQB2P05538 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC15.67■□□□□ 0.1
HLA-DQB2P05538 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC15.67■□□□□ 0.1
HLA-DQB2P05538 TERF1P3-201ENST00000505638 1227 ntBASIC15.67■□□□□ 0.1
HLA-DQB2P05538 AC104596.2-201ENST00000512793 793 ntBASIC15.67■□□□□ 0.1
HLA-DQB2P05538 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC15.67■□□□□ 0.1
HLA-DQB2P05538 WASH4P-201ENST00000564273 1246 ntBASIC15.67■□□□□ 0.1
HLA-DQB2P05538 SAMD11P1-201ENST00000571429 661 ntBASIC15.67■□□□□ 0.1
HLA-DQB2P05538 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC15.67■□□□□ 0.1
HLA-DQB2P05538 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC15.67■□□□□ 0.1
HLA-DQB2P05538 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
HLA-DQB2P05538 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
HLA-DQB2P05538 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
HLA-DQB2P05538 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC15.67■□□□□ 0.1
HLA-DQB2P05538 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HLA-DQB2P05538 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC15.67■□□□□ 0.1
HLA-DQB2P05538 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
HLA-DQB2P05538 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
HLA-DQB2P05538 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
HLA-DQB2P05538 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
HLA-DQB2P05538 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC15.67■□□□□ 0.1
HLA-DQB2P05538 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
HLA-DQB2P05538 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC15.67■□□□□ 0.1
HLA-DQB2P05538 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC15.67■□□□□ 0.1
HLA-DQB2P05538 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HLA-DQB2P05538 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HLA-DQB2P05538 INTS4P2-202ENST00000614726 2019 ntBASIC15.67■□□□□ 0.1
HLA-DQB2P05538 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC15.67■□□□□ 0.1
HLA-DQB2P05538 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC15.67■□□□□ 0.1
HLA-DQB2P05538 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC15.66■□□□□ 0.1
HLA-DQB2P05538 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC15.66■□□□□ 0.1
HLA-DQB2P05538 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
HLA-DQB2P05538 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC15.66■□□□□ 0.1
HLA-DQB2P05538 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HLA-DQB2P05538 ZBTB45P1-201ENST00000452761 1456 ntBASIC15.66■□□□□ 0.1
HLA-DQB2P05538 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
HLA-DQB2P05538 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HLA-DQB2P05538 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC15.66■□□□□ 0.1
HLA-DQB2P05538 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
HLA-DQB2P05538 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
HLA-DQB2P05538 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC15.66■□□□□ 0.1
HLA-DQB2P05538 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
HLA-DQB2P05538 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
HLA-DQB2P05538 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HLA-DQB2P05538 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HLA-DQB2P05538 SUN1-204ENST00000403868 978 ntTSL 2 BASIC15.66■□□□□ 0.1
HLA-DQB2P05538 PIN1P1-201ENST00000412108 996 ntBASIC15.66■□□□□ 0.1
HLA-DQB2P05538 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC15.66■□□□□ 0.1
HLA-DQB2P05538 AL353779.1-201ENST00000434793 351 ntBASIC15.66■□□□□ 0.1
HLA-DQB2P05538 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HLA-DQB2P05538 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
HLA-DQB2P05538 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC15.66■□□□□ 0.1
HLA-DQB2P05538 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
HLA-DQB2P05538 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC15.66■□□□□ 0.1
HLA-DQB2P05538 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC15.66■□□□□ 0.1
HLA-DQB2P05538 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC15.66■□□□□ 0.1
HLA-DQB2P05538 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC15.66■□□□□ 0.1
HLA-DQB2P05538 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
HLA-DQB2P05538 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HLA-DQB2P05538 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
HLA-DQB2P05538 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HLA-DQB2P05538 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HLA-DQB2P05538 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HLA-DQB2P05538 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
HLA-DQB2P05538 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
HLA-DQB2P05538 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
HLA-DQB2P05538 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
HLA-DQB2P05538 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
HLA-DQB2P05538 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms