Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
CD74P04233 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CD74P04233 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC13.05□□□□□ -0.32
CD74P04233 AQP6-205ENST00000618286 829 ntTSL 5 BASIC13.05□□□□□ -0.32
CD74P04233 AL031008.1-201ENST00000619963 541 ntBASIC13.05□□□□□ -0.32
CD74P04233 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC13.05□□□□□ -0.32
CD74P04233 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CD74P04233 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CD74P04233 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC13.05□□□□□ -0.32
CD74P04233 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CD74P04233 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
CD74P04233 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
CD74P04233 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC13.05□□□□□ -0.32
CD74P04233 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC13.05□□□□□ -0.32
CD74P04233 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
CD74P04233 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CD74P04233 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC13.05□□□□□ -0.32
CD74P04233 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC13.05□□□□□ -0.32
CD74P04233 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CD74P04233 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CD74P04233 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
CD74P04233 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
CD74P04233 AC012508.2-201ENST00000567613 1472 ntBASIC13.04□□□□□ -0.32
CD74P04233 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
CD74P04233 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC13.04□□□□□ -0.32
CD74P04233 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC13.04□□□□□ -0.32
CD74P04233 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC13.04□□□□□ -0.32
CD74P04233 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC13.04□□□□□ -0.32
CD74P04233 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC13.04□□□□□ -0.32
CD74P04233 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CD74P04233 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
CD74P04233 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CD74P04233 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CD74P04233 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
CD74P04233 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
CD74P04233 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CD74P04233 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CD74P04233 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CD74P04233 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC13.04□□□□□ -0.32
CD74P04233 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC13.04□□□□□ -0.32
CD74P04233 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC13.04□□□□□ -0.32
CD74P04233 CRCP-205ENST00000431089 942 ntTSL 2 BASIC13.04□□□□□ -0.32
CD74P04233 TPT1P11-201ENST00000458482 498 ntBASIC13.04□□□□□ -0.32
CD74P04233 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC13.04□□□□□ -0.32
CD74P04233 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC13.04□□□□□ -0.32
CD74P04233 RNA5SP410-201ENST00000516285 106 ntBASIC13.04□□□□□ -0.32
CD74P04233 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC13.04□□□□□ -0.32
CD74P04233 PENK-208ENST00000523051 772 ntTSL 5 BASIC13.04□□□□□ -0.32
CD74P04233 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC13.04□□□□□ -0.32
CD74P04233 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
CD74P04233 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC13.04□□□□□ -0.32
CD74P04233 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CD74P04233 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC13.04□□□□□ -0.32
CD74P04233 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
CD74P04233 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CD74P04233 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CD74P04233 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CD74P04233 BSG-215ENST00000618006 1329 ntTSL 2 BASIC13.04□□□□□ -0.32
CD74P04233 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CD74P04233 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CD74P04233 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
CD74P04233 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CD74P04233 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC13.04□□□□□ -0.32
CD74P04233 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC13.04□□□□□ -0.32
CD74P04233 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CD74P04233 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC13.04□□□□□ -0.32
CD74P04233 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CD74P04233 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CD74P04233 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
CD74P04233 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CD74P04233 MST1P2-201ENST00000457982 2291 ntBASIC13.04□□□□□ -0.32
CD74P04233 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
CD74P04233 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
CD74P04233 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CD74P04233 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
CD74P04233 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
CD74P04233 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
CD74P04233 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
CD74P04233 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
CD74P04233 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
CD74P04233 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC13.03□□□□□ -0.32
CD74P04233 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CD74P04233 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
CD74P04233 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
CD74P04233 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC13.03□□□□□ -0.32
CD74P04233 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
CD74P04233 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
CD74P04233 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
CD74P04233 AC055811.4-201ENST00000624039 1754 ntBASIC13.03□□□□□ -0.32
CD74P04233 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC13.03□□□□□ -0.32
CD74P04233 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CD74P04233 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
CD74P04233 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CD74P04233 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC13.03□□□□□ -0.32
CD74P04233 AZGP1P1-201ENST00000411909 902 ntBASIC13.03□□□□□ -0.32
CD74P04233 KRT18P67-201ENST00000432816 1264 ntBASIC13.03□□□□□ -0.32
CD74P04233 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC13.03□□□□□ -0.32
CD74P04233 FAM197Y8-203ENST00000450145 560 ntBASIC13.03□□□□□ -0.32
CD74P04233 AF186996.4-201ENST00000467186 377 ntBASIC13.03□□□□□ -0.32
CD74P04233 TOLLIP-AS1-201ENST00000530897 939 ntBASIC13.03□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 73.3 ms