Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC13.81□□□□□ -0.2
TRAF3IP2O43734 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TRAF3IP2O43734 BCRP1-201ENST00000444246 691 ntBASIC13.81□□□□□ -0.2
TRAF3IP2O43734 GNAQP1-201ENST00000444815 1067 ntBASIC13.81□□□□□ -0.2
TRAF3IP2O43734 SPTLC1P1-201ENST00000447199 261 ntBASIC13.81□□□□□ -0.2
TRAF3IP2O43734 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TRAF3IP2O43734 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRAF3IP2O43734 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TRAF3IP2O43734 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC13.81□□□□□ -0.2
TRAF3IP2O43734 AC036164.1-201ENST00000570544 333 ntBASIC13.81□□□□□ -0.2
TRAF3IP2O43734 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
TRAF3IP2O43734 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRAF3IP2O43734 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
TRAF3IP2O43734 GPX4-206ENST00000588919 803 ntTSL 2 BASIC13.81□□□□□ -0.2
TRAF3IP2O43734 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC13.81□□□□□ -0.2
TRAF3IP2O43734 AC009118.2-201ENST00000613275 655 ntBASIC13.81□□□□□ -0.2
TRAF3IP2O43734 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC13.81□□□□□ -0.2
TRAF3IP2O43734 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRAF3IP2O43734 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
TRAF3IP2O43734 AL645728.2-202ENST00000641679 227 ntBASIC13.81□□□□□ -0.2
TRAF3IP2O43734 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRAF3IP2O43734 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRAF3IP2O43734 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRAF3IP2O43734 TSPY26P-202ENST00000565928 3884 ntBASIC13.81□□□□□ -0.2
TRAF3IP2O43734 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRAF3IP2O43734 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC13.81□□□□□ -0.2
TRAF3IP2O43734 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRAF3IP2O43734 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRAF3IP2O43734 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TRAF3IP2O43734 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC13.81□□□□□ -0.2
TRAF3IP2O43734 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRAF3IP2O43734 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
TRAF3IP2O43734 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TRAF3IP2O43734 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC13.81□□□□□ -0.2
TRAF3IP2O43734 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRAF3IP2O43734 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRAF3IP2O43734 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TRAF3IP2O43734 PARN-202ENST00000420015 2360 ntTSL 2 BASIC13.81□□□□□ -0.2
TRAF3IP2O43734 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TRAF3IP2O43734 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC13.81□□□□□ -0.2
TRAF3IP2O43734 ANKRD26P3-201ENST00000454044 2748 ntBASIC13.81□□□□□ -0.2
TRAF3IP2O43734 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TRAF3IP2O43734 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC13.81□□□□□ -0.2
TRAF3IP2O43734 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
TRAF3IP2O43734 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRAF3IP2O43734 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRAF3IP2O43734 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TRAF3IP2O43734 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
TRAF3IP2O43734 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRAF3IP2O43734 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TRAF3IP2O43734 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC13.8□□□□□ -0.2
TRAF3IP2O43734 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC13.8□□□□□ -0.2
TRAF3IP2O43734 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
TRAF3IP2O43734 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRAF3IP2O43734 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRAF3IP2O43734 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRAF3IP2O43734 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRAF3IP2O43734 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRAF3IP2O43734 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC13.8□□□□□ -0.2
TRAF3IP2O43734 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TRAF3IP2O43734 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRAF3IP2O43734 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC13.8□□□□□ -0.2
TRAF3IP2O43734 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TRAF3IP2O43734 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRAF3IP2O43734 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRAF3IP2O43734 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC13.8□□□□□ -0.2
TRAF3IP2O43734 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRAF3IP2O43734 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC13.8□□□□□ -0.2
TRAF3IP2O43734 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TRAF3IP2O43734 AC093004.1-201ENST00000508850 424 ntBASIC13.8□□□□□ -0.2
TRAF3IP2O43734 SERBP1P5-201ENST00000510079 1181 ntBASIC13.8□□□□□ -0.2
TRAF3IP2O43734 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC13.8□□□□□ -0.2
TRAF3IP2O43734 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC13.8□□□□□ -0.2
TRAF3IP2O43734 SPCS2P1-201ENST00000561636 679 ntBASIC13.8□□□□□ -0.2
TRAF3IP2O43734 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC13.8□□□□□ -0.2
TRAF3IP2O43734 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC13.8□□□□□ -0.2
TRAF3IP2O43734 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC13.8□□□□□ -0.2
TRAF3IP2O43734 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TRAF3IP2O43734 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TRAF3IP2O43734 AL096865.1-201ENST00000606796 927 ntBASIC13.8□□□□□ -0.2
TRAF3IP2O43734 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC13.8□□□□□ -0.2
TRAF3IP2O43734 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
TRAF3IP2O43734 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
TRAF3IP2O43734 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRAF3IP2O43734 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
TRAF3IP2O43734 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC13.8□□□□□ -0.2
TRAF3IP2O43734 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRAF3IP2O43734 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC13.8□□□□□ -0.2
TRAF3IP2O43734 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
TRAF3IP2O43734 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC13.8□□□□□ -0.2
TRAF3IP2O43734 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC13.8□□□□□ -0.2
TRAF3IP2O43734 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TRAF3IP2O43734 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
TRAF3IP2O43734 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC13.8□□□□□ -0.2
TRAF3IP2O43734 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
TRAF3IP2O43734 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
TRAF3IP2O43734 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC13.79□□□□□ -0.2
TRAF3IP2O43734 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRAF3IP2O43734 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC13.79□□□□□ -0.2
TRAF3IP2O43734 MROH4P-201ENST00000431302 1578 ntBASIC13.79□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 63.2 ms