Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC14.85□□□□□ -0.03
PCDH17O14917 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
PCDH17O14917 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PCDH17O14917 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
PCDH17O14917 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
PCDH17O14917 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PCDH17O14917 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC14.84□□□□□ -0.03
PCDH17O14917 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PCDH17O14917 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
PCDH17O14917 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PCDH17O14917 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC14.84□□□□□ -0.03
PCDH17O14917 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PCDH17O14917 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
PCDH17O14917 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
PCDH17O14917 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
PCDH17O14917 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC14.84□□□□□ -0.03
PCDH17O14917 AP006294.1-201ENST00000415407 339 ntBASIC14.84□□□□□ -0.03
PCDH17O14917 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PCDH17O14917 TOMM22P5-201ENST00000416399 439 ntBASIC14.84□□□□□ -0.03
PCDH17O14917 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PCDH17O14917 RPL13P2-201ENST00000440687 659 ntBASIC14.84□□□□□ -0.03
PCDH17O14917 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC14.84□□□□□ -0.03
PCDH17O14917 KRT17P7-201ENST00000451704 1104 ntBASIC14.84□□□□□ -0.03
PCDH17O14917 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC14.84□□□□□ -0.03
PCDH17O14917 AC104596.2-201ENST00000512793 793 ntBASIC14.84□□□□□ -0.03
PCDH17O14917 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC14.84□□□□□ -0.03
PCDH17O14917 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC14.84□□□□□ -0.03
PCDH17O14917 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC14.84□□□□□ -0.03
PCDH17O14917 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC14.84□□□□□ -0.03
PCDH17O14917 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC14.84□□□□□ -0.03
PCDH17O14917 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PCDH17O14917 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PCDH17O14917 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC14.84□□□□□ -0.03
PCDH17O14917 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PCDH17O14917 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PCDH17O14917 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PCDH17O14917 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PCDH17O14917 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PCDH17O14917 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PCDH17O14917 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
PCDH17O14917 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PCDH17O14917 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PCDH17O14917 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PCDH17O14917 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PCDH17O14917 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
PCDH17O14917 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
PCDH17O14917 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PCDH17O14917 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC14.84□□□□□ -0.03
PCDH17O14917 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PCDH17O14917 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
PCDH17O14917 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
PCDH17O14917 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC14.83□□□□□ -0.03
PCDH17O14917 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.03
PCDH17O14917 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.03
PCDH17O14917 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
PCDH17O14917 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
PCDH17O14917 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
PCDH17O14917 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
PCDH17O14917 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
PCDH17O14917 MECR-202ENST00000373791 2416 ntTSL 2 BASIC14.83□□□□□ -0.04
PCDH17O14917 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
PCDH17O14917 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.04
PCDH17O14917 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PCDH17O14917 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PCDH17O14917 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PCDH17O14917 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC14.83□□□□□ -0.04
PCDH17O14917 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
PCDH17O14917 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
PCDH17O14917 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC14.83□□□□□ -0.04
PCDH17O14917 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC14.83□□□□□ -0.04
PCDH17O14917 GNAQP1-201ENST00000444815 1067 ntBASIC14.83□□□□□ -0.04
PCDH17O14917 NAA50-208ENST00000497255 789 ntTSL 5 BASIC14.83□□□□□ -0.04
PCDH17O14917 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC14.83□□□□□ -0.04
PCDH17O14917 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC14.83□□□□□ -0.04
PCDH17O14917 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC14.83□□□□□ -0.04
PCDH17O14917 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC14.83□□□□□ -0.04
PCDH17O14917 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC14.83□□□□□ -0.04
PCDH17O14917 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC14.83□□□□□ -0.04
PCDH17O14917 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC14.83□□□□□ -0.04
PCDH17O14917 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC14.83□□□□□ -0.04
PCDH17O14917 AC036164.1-201ENST00000570544 333 ntBASIC14.83□□□□□ -0.04
PCDH17O14917 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
PCDH17O14917 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
PCDH17O14917 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PCDH17O14917 AC067930.6-201ENST00000623257 4947 ntBASIC14.83□□□□□ -0.04
PCDH17O14917 REXO1L1P-202ENST00000608646 1974 ntBASIC14.83□□□□□ -0.04
PCDH17O14917 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
PCDH17O14917 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PCDH17O14917 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC14.83□□□□□ -0.04
PCDH17O14917 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC14.83□□□□□ -0.04
PCDH17O14917 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
PCDH17O14917 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC14.83□□□□□ -0.04
PCDH17O14917 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
PCDH17O14917 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
PCDH17O14917 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC14.82□□□□□ -0.04
PCDH17O14917 AC138969.3-201ENST00000546612 1459 ntBASIC14.82□□□□□ -0.04
PCDH17O14917 AC138932.2-201ENST00000548268 1459 ntBASIC14.82□□□□□ -0.04
PCDH17O14917 AC126755.4-201ENST00000549796 1459 ntBASIC14.82□□□□□ -0.04
PCDH17O14917 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCDH17O14917 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 57.8 ms