Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC22.5■■□□□ 1.19
SHANK2Q9UPX8 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC22.5■■□□□ 1.19
SHANK2Q9UPX8 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
SHANK2Q9UPX8 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC22.5■■□□□ 1.19
SHANK2Q9UPX8 AC006058.4-201ENST00000624016 1670 ntBASIC22.5■■□□□ 1.19
SHANK2Q9UPX8 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
SHANK2Q9UPX8 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
SHANK2Q9UPX8 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC22.5■■□□□ 1.19
SHANK2Q9UPX8 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC22.49■■□□□ 1.19
SHANK2Q9UPX8 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
SHANK2Q9UPX8 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC22.49■■□□□ 1.19
SHANK2Q9UPX8 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC22.49■■□□□ 1.19
SHANK2Q9UPX8 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC22.49■■□□□ 1.19
SHANK2Q9UPX8 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
SHANK2Q9UPX8 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC22.49■■□□□ 1.19
SHANK2Q9UPX8 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC22.49■■□□□ 1.19
SHANK2Q9UPX8 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
SHANK2Q9UPX8 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
SHANK2Q9UPX8 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
SHANK2Q9UPX8 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC22.49■■□□□ 1.19
SHANK2Q9UPX8 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
SHANK2Q9UPX8 AL161670.2-201ENST00000557650 1227 ntBASIC22.49■■□□□ 1.19
SHANK2Q9UPX8 RN7SL774P-201ENST00000577467 290 ntBASIC22.49■■□□□ 1.19
SHANK2Q9UPX8 AC079336.7-201ENST00000623428 1078 ntBASIC22.49■■□□□ 1.19
SHANK2Q9UPX8 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC22.49■■□□□ 1.19
SHANK2Q9UPX8 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
SHANK2Q9UPX8 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
SHANK2Q9UPX8 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC22.49■■□□□ 1.19
SHANK2Q9UPX8 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
SHANK2Q9UPX8 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC22.49■■□□□ 1.19
SHANK2Q9UPX8 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
SHANK2Q9UPX8 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC22.49■■□□□ 1.19
SHANK2Q9UPX8 AC244394.1-201ENST00000435000 1665 ntBASIC22.48■■□□□ 1.19
SHANK2Q9UPX8 HLA-DQB2-231ENST00000435145 2026 ntBASIC22.48■■□□□ 1.19
SHANK2Q9UPX8 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC22.48■■□□□ 1.19
SHANK2Q9UPX8 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC22.48■■□□□ 1.19
SHANK2Q9UPX8 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC22.48■■□□□ 1.19
SHANK2Q9UPX8 AC020910.5-201ENST00000623668 1865 ntBASIC22.48■■□□□ 1.19
SHANK2Q9UPX8 AC023090.2-201ENST00000625182 2110 ntBASIC22.48■■□□□ 1.19
SHANK2Q9UPX8 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
SHANK2Q9UPX8 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC22.48■■□□□ 1.19
SHANK2Q9UPX8 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
SHANK2Q9UPX8 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC22.48■■□□□ 1.19
SHANK2Q9UPX8 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC22.48■■□□□ 1.19
SHANK2Q9UPX8 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
SHANK2Q9UPX8 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC22.48■■□□□ 1.19
SHANK2Q9UPX8 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
SHANK2Q9UPX8 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
SHANK2Q9UPX8 AC103988.2-201ENST00000561804 725 ntBASIC22.48■■□□□ 1.19
SHANK2Q9UPX8 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC22.48■■□□□ 1.19
SHANK2Q9UPX8 AC008825.2-201ENST00000603374 718 ntBASIC22.48■■□□□ 1.19
SHANK2Q9UPX8 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC22.48■■□□□ 1.19
SHANK2Q9UPX8 RPL35-206ENST00000629845 340 ntTSL 5 BASIC22.48■■□□□ 1.19
SHANK2Q9UPX8 AC004923.1-202ENST00000642106 209 ntBASIC22.48■■□□□ 1.19
SHANK2Q9UPX8 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
SHANK2Q9UPX8 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC22.48■■□□□ 1.19
SHANK2Q9UPX8 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC22.48■■□□□ 1.19
SHANK2Q9UPX8 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
SHANK2Q9UPX8 WARS-232ENST00000556645 2508 ntTSL 5 BASIC22.48■■□□□ 1.19
SHANK2Q9UPX8 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
SHANK2Q9UPX8 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
SHANK2Q9UPX8 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
SHANK2Q9UPX8 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC22.48■■□□□ 1.19
SHANK2Q9UPX8 AC087481.3-201ENST00000602886 1894 ntBASIC22.48■■□□□ 1.19
SHANK2Q9UPX8 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
SHANK2Q9UPX8 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC22.48■■□□□ 1.19
SHANK2Q9UPX8 FAM90A7P-201ENST00000382628 1395 ntBASIC22.48■■□□□ 1.19
SHANK2Q9UPX8 FAM90A23P-201ENST00000400136 1395 ntBASIC22.48■■□□□ 1.19
SHANK2Q9UPX8 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC22.48■■□□□ 1.19
SHANK2Q9UPX8 AL008718.2-201ENST00000609206 1313 ntBASIC22.47■■□□□ 1.19
SHANK2Q9UPX8 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC22.47■■□□□ 1.19
SHANK2Q9UPX8 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
SHANK2Q9UPX8 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
SHANK2Q9UPX8 PARVG-202ENST00000415224 999 ntTSL 2 BASIC22.47■■□□□ 1.19
SHANK2Q9UPX8 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC22.47■■□□□ 1.19
SHANK2Q9UPX8 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
SHANK2Q9UPX8 AC021723.1-201ENST00000486306 515 ntBASIC22.47■■□□□ 1.19
SHANK2Q9UPX8 AC116345.2-201ENST00000512837 523 ntBASIC22.47■■□□□ 1.19
SHANK2Q9UPX8 FANCA-205ENST00000543736 1000 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
SHANK2Q9UPX8 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC22.47■■□□□ 1.19
SHANK2Q9UPX8 PRKXP1-201ENST00000561423 1122 ntBASIC22.47■■□□□ 1.19
SHANK2Q9UPX8 MIR3907-201ENST00000579424 151 ntBASIC22.47■■□□□ 1.19
SHANK2Q9UPX8 RN7SL555P-201ENST00000584742 339 ntBASIC22.47■■□□□ 1.19
SHANK2Q9UPX8 HLA-C-210ENST00000640219 976 ntBASIC22.47■■□□□ 1.19
SHANK2Q9UPX8 AL359258.3-201ENST00000622910 2331 ntBASIC22.47■■□□□ 1.19
SHANK2Q9UPX8 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
SHANK2Q9UPX8 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
SHANK2Q9UPX8 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
SHANK2Q9UPX8 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
SHANK2Q9UPX8 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC22.47■■□□□ 1.19
SHANK2Q9UPX8 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
SHANK2Q9UPX8 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
SHANK2Q9UPX8 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC22.47■■□□□ 1.19
SHANK2Q9UPX8 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
SHANK2Q9UPX8 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
SHANK2Q9UPX8 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
SHANK2Q9UPX8 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
SHANK2Q9UPX8 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
SHANK2Q9UPX8 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
SHANK2Q9UPX8 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms