Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 NR1I2-206ENST00000638727 1194 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
MACF1Q9UPN3 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
MACF1Q9UPN3 AC011840.2-201ENST00000563063 1520 ntBASIC6.09□□□□□ -1.43
MACF1Q9UPN3 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
MACF1Q9UPN3 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
MACF1Q9UPN3 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC6.09□□□□□ -1.43
MACF1Q9UPN3 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
MACF1Q9UPN3 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC6.09□□□□□ -1.43
MACF1Q9UPN3 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
MACF1Q9UPN3 ZNF691-201ENST00000372502 1910 ntAPPRIS ALT2 TSL 2 BASIC6.09□□□□□ -1.43
MACF1Q9UPN3 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
MACF1Q9UPN3 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
MACF1Q9UPN3 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC6.09□□□□□ -1.43
MACF1Q9UPN3 AC109597.2-201ENST00000569407 927 ntTSL 3 BASIC6.09□□□□□ -1.43
MACF1Q9UPN3 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
MACF1Q9UPN3 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
MACF1Q9UPN3 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
MACF1Q9UPN3 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC6.09□□□□□ -1.43
MACF1Q9UPN3 CTNNBL1-203ENST00000373473 1493 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
MACF1Q9UPN3 CRYGD-201ENST00000264376 619 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
MACF1Q9UPN3 JTB-202ENST00000356648 1040 ntTSL 2 BASIC6.09□□□□□ -1.43
MACF1Q9UPN3 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC6.09□□□□□ -1.43
MACF1Q9UPN3 AC007690.1-201ENST00000451924 468 ntBASIC6.09□□□□□ -1.43
MACF1Q9UPN3 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
MACF1Q9UPN3 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC6.09□□□□□ -1.43
MACF1Q9UPN3 AC116562.4-201ENST00000641316 2276 ntBASIC6.09□□□□□ -1.43
MACF1Q9UPN3 AC134407.2-201ENST00000625089 1978 ntBASIC6.09□□□□□ -1.43
MACF1Q9UPN3 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
MACF1Q9UPN3 FST-202ENST00000396947 2538 ntTSL 5 BASIC6.09□□□□□ -1.43
MACF1Q9UPN3 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
MACF1Q9UPN3 PCGF3-213ENST00000620529 1899 ntBASIC6.09□□□□□ -1.43
MACF1Q9UPN3 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC6.09□□□□□ -1.43
MACF1Q9UPN3 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
MACF1Q9UPN3 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
MACF1Q9UPN3 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
MACF1Q9UPN3 MRPL23-203ENST00000397294 551 ntTSL 4 BASIC6.09□□□□□ -1.43
MACF1Q9UPN3 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
MACF1Q9UPN3 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
MACF1Q9UPN3 AL591242.1-201ENST00000422284 343 ntTSL 2 BASIC6.09□□□□□ -1.43
MACF1Q9UPN3 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC6.09□□□□□ -1.43
MACF1Q9UPN3 UGT1A12P-201ENST00000447084 853 ntBASIC6.09□□□□□ -1.43
MACF1Q9UPN3 LIMD2-210ENST00000582055 509 ntTSL 2 BASIC6.09□□□□□ -1.43
MACF1Q9UPN3 AL357137.1-201ENST00000604645 203 ntBASIC6.09□□□□□ -1.43
MACF1Q9UPN3 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC6.09□□□□□ -1.43
MACF1Q9UPN3 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC6.09□□□□□ -1.43
MACF1Q9UPN3 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC6.09□□□□□ -1.43
MACF1Q9UPN3 TP73-207ENST00000378290 1831 ntTSL 2 BASIC6.09□□□□□ -1.43
MACF1Q9UPN3 PCK2-208ENST00000559250 1804 ntTSL 5 BASIC6.09□□□□□ -1.43
MACF1Q9UPN3 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.43
MACF1Q9UPN3 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC6.09□□□□□ -1.43
MACF1Q9UPN3 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC6.09□□□□□ -1.43
MACF1Q9UPN3 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC6.09□□□□□ -1.43
MACF1Q9UPN3 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
MACF1Q9UPN3 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
MACF1Q9UPN3 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC6.09□□□□□ -1.43
MACF1Q9UPN3 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC6.09□□□□□ -1.43
MACF1Q9UPN3 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC6.09□□□□□ -1.43
MACF1Q9UPN3 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
MACF1Q9UPN3 KRTAP10-9-201ENST00000397911 1171 ntAPPRIS P2 BASIC6.09□□□□□ -1.43
MACF1Q9UPN3 LINC01494-201ENST00000419511 1011 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
MACF1Q9UPN3 CMPK1-204ENST00000450808 950 ntTSL 2 BASIC6.09□□□□□ -1.43
MACF1Q9UPN3 IGKV1D-43-201ENST00000468879 532 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
MACF1Q9UPN3 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC6.09□□□□□ -1.43
MACF1Q9UPN3 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC6.09□□□□□ -1.43
MACF1Q9UPN3 AC017100.1-201ENST00000565978 1169 ntBASIC6.09□□□□□ -1.43
MACF1Q9UPN3 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC6.09□□□□□ -1.43
MACF1Q9UPN3 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC6.09□□□□□ -1.43
MACF1Q9UPN3 AC097359.3-201ENST00000603982 1210 ntBASIC6.09□□□□□ -1.43
MACF1Q9UPN3 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC6.09□□□□□ -1.44
MACF1Q9UPN3 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
MACF1Q9UPN3 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
MACF1Q9UPN3 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
MACF1Q9UPN3 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.44
MACF1Q9UPN3 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC6.09□□□□□ -1.44
MACF1Q9UPN3 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC6.09□□□□□ -1.44
MACF1Q9UPN3 SGCA-202ENST00000344627 1057 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
MACF1Q9UPN3 GLIPR2-201ENST00000377959 812 ntTSL 3 BASIC6.09□□□□□ -1.44
MACF1Q9UPN3 RN7SL788P-201ENST00000460504 316 ntBASIC6.09□□□□□ -1.44
MACF1Q9UPN3 RPL18AP8-201ENST00000486071 528 ntBASIC6.09□□□□□ -1.44
MACF1Q9UPN3 MESTP3-201ENST00000503460 968 ntBASIC6.09□□□□□ -1.44
MACF1Q9UPN3 AC009065.4-201ENST00000563734 543 ntTSL 3 BASIC6.09□□□□□ -1.44
MACF1Q9UPN3 AC134878.2-201ENST00000620700 1265 ntBASIC6.09□□□□□ -1.44
MACF1Q9UPN3 ST5-261ENST00000626808 1071 ntTSL 5 BASIC6.09□□□□□ -1.44
MACF1Q9UPN3 AR-207ENST00000612010 3896 ntTSL 5 BASIC6.09□□□□□ -1.44
MACF1Q9UPN3 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
MACF1Q9UPN3 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
MACF1Q9UPN3 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
MACF1Q9UPN3 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
MACF1Q9UPN3 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
MACF1Q9UPN3 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC6.08□□□□□ -1.44
MACF1Q9UPN3 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
MACF1Q9UPN3 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
MACF1Q9UPN3 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
MACF1Q9UPN3 FTHL17-201ENST00000359202 813 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
MACF1Q9UPN3 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
MACF1Q9UPN3 LSM5-207ENST00000410044 687 ntTSL 3 BASIC6.08□□□□□ -1.44
MACF1Q9UPN3 RGS5-216ENST00000449680 788 ntTSL 3 BASIC6.08□□□□□ -1.44
MACF1Q9UPN3 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
MACF1Q9UPN3 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC6.08□□□□□ -1.44
MACF1Q9UPN3 AL162231.1-205ENST00000544078 338 ntAPPRIS P2 TSL 2 BASIC6.08□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 66.5 ms