Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NEUROD4Q9HD90 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NEUROD4Q9HD90 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC14.69□□□□□ -0.06
NEUROD4Q9HD90 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC14.69□□□□□ -0.06
NEUROD4Q9HD90 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NEUROD4Q9HD90 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
NEUROD4Q9HD90 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
NEUROD4Q9HD90 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
NEUROD4Q9HD90 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC14.69□□□□□ -0.06
NEUROD4Q9HD90 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC14.69□□□□□ -0.06
NEUROD4Q9HD90 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC14.69□□□□□ -0.06
NEUROD4Q9HD90 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
NEUROD4Q9HD90 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
NEUROD4Q9HD90 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
NEUROD4Q9HD90 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NEUROD4Q9HD90 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
NEUROD4Q9HD90 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NEUROD4Q9HD90 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
NEUROD4Q9HD90 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
NEUROD4Q9HD90 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
NEUROD4Q9HD90 PPP6R2P1-201ENST00000450880 1275 ntBASIC14.69□□□□□ -0.06
NEUROD4Q9HD90 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC14.69□□□□□ -0.06
NEUROD4Q9HD90 RN7SL618P-201ENST00000477850 296 ntBASIC14.69□□□□□ -0.06
NEUROD4Q9HD90 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
NEUROD4Q9HD90 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
NEUROD4Q9HD90 INO80C-206ENST00000586489 594 ntTSL 3 BASIC14.69□□□□□ -0.06
NEUROD4Q9HD90 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC14.69□□□□□ -0.06
NEUROD4Q9HD90 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC14.69□□□□□ -0.06
NEUROD4Q9HD90 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC14.69□□□□□ -0.06
NEUROD4Q9HD90 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
NEUROD4Q9HD90 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NEUROD4Q9HD90 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
NEUROD4Q9HD90 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NEUROD4Q9HD90 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
NEUROD4Q9HD90 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NEUROD4Q9HD90 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC14.69□□□□□ -0.06
NEUROD4Q9HD90 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
NEUROD4Q9HD90 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NEUROD4Q9HD90 WASH3P-207ENST00000560956 1394 ntBASIC14.69□□□□□ -0.06
NEUROD4Q9HD90 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
NEUROD4Q9HD90 AP002414.2-201ENST00000591780 3365 ntBASIC14.69□□□□□ -0.06
NEUROD4Q9HD90 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NEUROD4Q9HD90 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NEUROD4Q9HD90 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
NEUROD4Q9HD90 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
NEUROD4Q9HD90 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NEUROD4Q9HD90 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
NEUROD4Q9HD90 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
NEUROD4Q9HD90 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
NEUROD4Q9HD90 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC14.69□□□□□ -0.06
NEUROD4Q9HD90 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC14.68□□□□□ -0.06
NEUROD4Q9HD90 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NEUROD4Q9HD90 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NEUROD4Q9HD90 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
NEUROD4Q9HD90 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NEUROD4Q9HD90 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NEUROD4Q9HD90 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC14.68□□□□□ -0.06
NEUROD4Q9HD90 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
NEUROD4Q9HD90 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC14.68□□□□□ -0.06
NEUROD4Q9HD90 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NEUROD4Q9HD90 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NEUROD4Q9HD90 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
NEUROD4Q9HD90 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
NEUROD4Q9HD90 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC14.68□□□□□ -0.06
NEUROD4Q9HD90 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
NEUROD4Q9HD90 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
NEUROD4Q9HD90 APOBEC3H-202ENST00000401756 1023 ntAPPRIS ALT2 TSL 3 BASIC14.68□□□□□ -0.06
NEUROD4Q9HD90 AC074338.1-201ENST00000416825 156 ntBASIC14.68□□□□□ -0.06
NEUROD4Q9HD90 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC14.68□□□□□ -0.06
NEUROD4Q9HD90 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC14.68□□□□□ -0.06
NEUROD4Q9HD90 VPS29-207ENST00000549970 818 ntTSL 3 BASIC14.68□□□□□ -0.06
NEUROD4Q9HD90 RPL28-205ENST00000558131 444 ntTSL 5 BASIC14.68□□□□□ -0.06
NEUROD4Q9HD90 AC015911.4-201ENST00000588022 1070 ntBASIC14.68□□□□□ -0.06
NEUROD4Q9HD90 AC074044.1-201ENST00000609673 707 ntBASIC14.68□□□□□ -0.06
NEUROD4Q9HD90 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
NEUROD4Q9HD90 SPDYE12P-201ENST00000618416 771 ntBASIC14.68□□□□□ -0.06
NEUROD4Q9HD90 AJ011932.1-201ENST00000621707 465 ntBASIC14.68□□□□□ -0.06
NEUROD4Q9HD90 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
NEUROD4Q9HD90 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NEUROD4Q9HD90 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
NEUROD4Q9HD90 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
NEUROD4Q9HD90 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
NEUROD4Q9HD90 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
NEUROD4Q9HD90 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC14.68□□□□□ -0.06
NEUROD4Q9HD90 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC14.68□□□□□ -0.06
NEUROD4Q9HD90 TK1-203ENST00000588734 1681 ntTSL 2 BASIC14.68□□□□□ -0.06
NEUROD4Q9HD90 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NEUROD4Q9HD90 GPI-205ENST00000586425 1799 ntTSL 5 BASIC14.68□□□□□ -0.06
NEUROD4Q9HD90 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
NEUROD4Q9HD90 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
NEUROD4Q9HD90 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC14.67□□□□□ -0.06
NEUROD4Q9HD90 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
NEUROD4Q9HD90 DEK-201ENST00000244776 1441 ntTSL 2 BASIC14.67□□□□□ -0.06
NEUROD4Q9HD90 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC14.67□□□□□ -0.06
NEUROD4Q9HD90 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
NEUROD4Q9HD90 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
NEUROD4Q9HD90 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC14.67□□□□□ -0.06
NEUROD4Q9HD90 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC14.67□□□□□ -0.06
NEUROD4Q9HD90 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
NEUROD4Q9HD90 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 62.5 ms