Protein–RNA interactions for Protein: Q9H2F9

CCDC68, Coiled-coil domain-containing protein 68, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC68Q9H2F9 C18orf15-201ENST00000623680 2534 ntBASIC15.62■□□□□ 0.09
CCDC68Q9H2F9 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC15.62■□□□□ 0.09
CCDC68Q9H2F9 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CCDC68Q9H2F9 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CCDC68Q9H2F9 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC15.62■□□□□ 0.09
CCDC68Q9H2F9 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CCDC68Q9H2F9 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
CCDC68Q9H2F9 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CCDC68Q9H2F9 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC15.62■□□□□ 0.09
CCDC68Q9H2F9 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CCDC68Q9H2F9 PPP6R2P1-201ENST00000450880 1275 ntBASIC15.62■□□□□ 0.09
CCDC68Q9H2F9 AC125807.1-201ENST00000483097 614 ntBASIC15.62■□□□□ 0.09
CCDC68Q9H2F9 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CCDC68Q9H2F9 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC15.62■□□□□ 0.09
CCDC68Q9H2F9 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC15.62■□□□□ 0.09
CCDC68Q9H2F9 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CCDC68Q9H2F9 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC15.62■□□□□ 0.09
CCDC68Q9H2F9 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC15.62■□□□□ 0.09
CCDC68Q9H2F9 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CCDC68Q9H2F9 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC15.62■□□□□ 0.09
CCDC68Q9H2F9 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
CCDC68Q9H2F9 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC15.62■□□□□ 0.09
CCDC68Q9H2F9 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC15.62■□□□□ 0.09
CCDC68Q9H2F9 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC15.62■□□□□ 0.09
CCDC68Q9H2F9 GPER1-207ENST00000619052 571 ntTSL 2 BASIC15.62■□□□□ 0.09
CCDC68Q9H2F9 Z92544.3-201ENST00000624747 417 ntBASIC15.62■□□□□ 0.09
CCDC68Q9H2F9 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
CCDC68Q9H2F9 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC15.62■□□□□ 0.09
CCDC68Q9H2F9 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
CCDC68Q9H2F9 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CCDC68Q9H2F9 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC15.62■□□□□ 0.09
CCDC68Q9H2F9 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CCDC68Q9H2F9 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
CCDC68Q9H2F9 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CCDC68Q9H2F9 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CCDC68Q9H2F9 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CCDC68Q9H2F9 TUBB3P1-201ENST00000405796 1332 ntBASIC15.62■□□□□ 0.09
CCDC68Q9H2F9 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CCDC68Q9H2F9 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC15.62■□□□□ 0.09
CCDC68Q9H2F9 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CCDC68Q9H2F9 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CCDC68Q9H2F9 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CCDC68Q9H2F9 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CCDC68Q9H2F9 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
CCDC68Q9H2F9 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC15.62■□□□□ 0.09
CCDC68Q9H2F9 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CCDC68Q9H2F9 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CCDC68Q9H2F9 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CCDC68Q9H2F9 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CCDC68Q9H2F9 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CCDC68Q9H2F9 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CCDC68Q9H2F9 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CCDC68Q9H2F9 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CCDC68Q9H2F9 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC15.61■□□□□ 0.09
CCDC68Q9H2F9 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
CCDC68Q9H2F9 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
CCDC68Q9H2F9 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC15.61■□□□□ 0.09
CCDC68Q9H2F9 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
CCDC68Q9H2F9 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CCDC68Q9H2F9 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
CCDC68Q9H2F9 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC15.61■□□□□ 0.09
CCDC68Q9H2F9 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC15.61■□□□□ 0.09
CCDC68Q9H2F9 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
CCDC68Q9H2F9 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CCDC68Q9H2F9 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CCDC68Q9H2F9 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
CCDC68Q9H2F9 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CCDC68Q9H2F9 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
CCDC68Q9H2F9 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC15.61■□□□□ 0.09
CCDC68Q9H2F9 HIST3H2BA-201ENST00000436555 524 ntBASIC15.61■□□□□ 0.09
CCDC68Q9H2F9 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC15.61■□□□□ 0.09
CCDC68Q9H2F9 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC15.61■□□□□ 0.09
CCDC68Q9H2F9 AC067863.1-201ENST00000494933 530 ntBASIC15.61■□□□□ 0.09
CCDC68Q9H2F9 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC15.61■□□□□ 0.09
CCDC68Q9H2F9 AC109322.1-201ENST00000524499 1264 ntBASIC15.61■□□□□ 0.09
CCDC68Q9H2F9 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC15.61■□□□□ 0.09
CCDC68Q9H2F9 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
CCDC68Q9H2F9 WDR88-203ENST00000592765 651 ntTSL 5 BASIC15.61■□□□□ 0.09
CCDC68Q9H2F9 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
CCDC68Q9H2F9 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
CCDC68Q9H2F9 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
CCDC68Q9H2F9 AC023511.2-201ENST00000618803 211 ntBASIC15.61■□□□□ 0.09
CCDC68Q9H2F9 AL033527.5-202ENST00000641632 1098 ntBASIC15.61■□□□□ 0.09
CCDC68Q9H2F9 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
CCDC68Q9H2F9 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
CCDC68Q9H2F9 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CCDC68Q9H2F9 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC15.61■□□□□ 0.09
CCDC68Q9H2F9 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CCDC68Q9H2F9 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC15.61■□□□□ 0.09
CCDC68Q9H2F9 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
CCDC68Q9H2F9 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
CCDC68Q9H2F9 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CCDC68Q9H2F9 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CCDC68Q9H2F9 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CCDC68Q9H2F9 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CCDC68Q9H2F9 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC15.61■□□□□ 0.09
CCDC68Q9H2F9 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CCDC68Q9H2F9 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CCDC68Q9H2F9 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC15.61■□□□□ 0.09
CCDC68Q9H2F9 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms