Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 MVK-214ENST00000629016 1591 ntTSL 5 BASIC15.88■□□□□ 0.13
CDCA3Q99618 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
CDCA3Q99618 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CDCA3Q99618 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDCA3Q99618 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC15.88■□□□□ 0.13
CDCA3Q99618 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDCA3Q99618 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDCA3Q99618 RPL18P13-201ENST00000478088 569 ntBASIC15.88■□□□□ 0.13
CDCA3Q99618 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC15.88■□□□□ 0.13
CDCA3Q99618 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CDCA3Q99618 PGAM1P5-201ENST00000548011 764 ntBASIC15.88■□□□□ 0.13
CDCA3Q99618 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC15.88■□□□□ 0.13
CDCA3Q99618 AL160314.3-201ENST00000556041 767 ntBASIC15.88■□□□□ 0.13
CDCA3Q99618 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC15.88■□□□□ 0.13
CDCA3Q99618 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC15.88■□□□□ 0.13
CDCA3Q99618 MIR4783-201ENST00000580343 82 ntBASIC15.88■□□□□ 0.13
CDCA3Q99618 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC15.88■□□□□ 0.13
CDCA3Q99618 AC008825.2-201ENST00000603374 718 ntBASIC15.88■□□□□ 0.13
CDCA3Q99618 AC011491.1-203ENST00000637688 543 ntBASIC15.88■□□□□ 0.13
CDCA3Q99618 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CDCA3Q99618 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CDCA3Q99618 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
CDCA3Q99618 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CDCA3Q99618 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CDCA3Q99618 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CDCA3Q99618 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDCA3Q99618 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CDCA3Q99618 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC15.88■□□□□ 0.13
CDCA3Q99618 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
CDCA3Q99618 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
CDCA3Q99618 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDCA3Q99618 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
CDCA3Q99618 EML3-212ENST00000494176 2901 ntTSL 2 BASIC15.88■□□□□ 0.13
CDCA3Q99618 EML3-216ENST00000529309 2909 ntTSL 2 BASIC15.88■□□□□ 0.13
CDCA3Q99618 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
CDCA3Q99618 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
CDCA3Q99618 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC15.87■□□□□ 0.13
CDCA3Q99618 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
CDCA3Q99618 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
CDCA3Q99618 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
CDCA3Q99618 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
CDCA3Q99618 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC15.87■□□□□ 0.13
CDCA3Q99618 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
CDCA3Q99618 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CDCA3Q99618 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC15.87■□□□□ 0.13
CDCA3Q99618 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CDCA3Q99618 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC15.87■□□□□ 0.13
CDCA3Q99618 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC15.87■□□□□ 0.13
CDCA3Q99618 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC15.87■□□□□ 0.13
CDCA3Q99618 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC15.87■□□□□ 0.13
CDCA3Q99618 AC012441.2-201ENST00000444843 739 ntBASIC15.87■□□□□ 0.13
CDCA3Q99618 RCC2P8-201ENST00000502779 1035 ntBASIC15.87■□□□□ 0.13
CDCA3Q99618 AC026434.2-201ENST00000506094 1078 ntBASIC15.87■□□□□ 0.13
CDCA3Q99618 AC116345.2-201ENST00000512837 523 ntBASIC15.87■□□□□ 0.13
CDCA3Q99618 POU5F1P2-201ENST00000521750 823 ntBASIC15.87■□□□□ 0.13
CDCA3Q99618 AC009779.1-201ENST00000551138 283 ntBASIC15.87■□□□□ 0.13
CDCA3Q99618 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
CDCA3Q99618 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CDCA3Q99618 AC073352.2-201ENST00000609385 439 ntBASIC15.87■□□□□ 0.13
CDCA3Q99618 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC15.87■□□□□ 0.13
CDCA3Q99618 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CDCA3Q99618 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CDCA3Q99618 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CDCA3Q99618 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC15.87■□□□□ 0.13
CDCA3Q99618 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CDCA3Q99618 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
CDCA3Q99618 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC15.87■□□□□ 0.13
CDCA3Q99618 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CDCA3Q99618 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CDCA3Q99618 AC127383.1-201ENST00000444697 1800 ntBASIC15.87■□□□□ 0.13
CDCA3Q99618 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CDCA3Q99618 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CDCA3Q99618 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CDCA3Q99618 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CDCA3Q99618 AGGF1P2-201ENST00000426656 2106 ntBASIC15.86■□□□□ 0.13
CDCA3Q99618 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CDCA3Q99618 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CDCA3Q99618 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CDCA3Q99618 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
CDCA3Q99618 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CDCA3Q99618 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CDCA3Q99618 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
CDCA3Q99618 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC15.86■□□□□ 0.13
CDCA3Q99618 ZBTB45P1-201ENST00000452761 1456 ntBASIC15.86■□□□□ 0.13
CDCA3Q99618 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC15.86■□□□□ 0.13
CDCA3Q99618 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
CDCA3Q99618 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC15.86■□□□□ 0.13
CDCA3Q99618 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC15.86■□□□□ 0.13
CDCA3Q99618 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CDCA3Q99618 CELA2B-201ENST00000375910 923 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CDCA3Q99618 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CDCA3Q99618 AIMP2-202ENST00000395236 860 ntTSL 2 BASIC15.86■□□□□ 0.13
CDCA3Q99618 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
CDCA3Q99618 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
CDCA3Q99618 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC15.86■□□□□ 0.13
CDCA3Q99618 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC15.86■□□□□ 0.13
CDCA3Q99618 MIR4754-201ENST00000582477 89 ntBASIC15.86■□□□□ 0.13
CDCA3Q99618 IRF3-215ENST00000596822 823 ntTSL 3 BASIC15.86■□□□□ 0.13
CDCA3Q99618 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC15.86■□□□□ 0.13
CDCA3Q99618 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC15.86■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 73.2 ms