Protein–RNA interactions for Protein: Q96RY5

CRAMP1, Protein cramped-like, humanhuman

Predictions only

Length 1,269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRAMP1Q96RY5 CDC23-208ENST00000505120 455 ntTSL 3 BASIC18.66■□□□□ 0.58
CRAMP1Q96RY5 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC18.66■□□□□ 0.58
CRAMP1Q96RY5 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CRAMP1Q96RY5 AC100827.2-201ENST00000563214 1194 ntBASIC18.66■□□□□ 0.58
CRAMP1Q96RY5 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CRAMP1Q96RY5 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
CRAMP1Q96RY5 AC090164.2-201ENST00000611487 516 ntBASIC18.66■□□□□ 0.58
CRAMP1Q96RY5 AL353726.2-201ENST00000623259 884 ntBASIC18.66■□□□□ 0.58
CRAMP1Q96RY5 AC002472.3-201ENST00000640124 621 ntBASIC18.66■□□□□ 0.58
CRAMP1Q96RY5 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CRAMP1Q96RY5 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CRAMP1Q96RY5 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
CRAMP1Q96RY5 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC18.66■□□□□ 0.58
CRAMP1Q96RY5 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC18.66■□□□□ 0.58
CRAMP1Q96RY5 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC18.66■□□□□ 0.58
CRAMP1Q96RY5 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CRAMP1Q96RY5 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
CRAMP1Q96RY5 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CRAMP1Q96RY5 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CRAMP1Q96RY5 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC18.66■□□□□ 0.58
CRAMP1Q96RY5 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CRAMP1Q96RY5 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC18.66■□□□□ 0.58
CRAMP1Q96RY5 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CRAMP1Q96RY5 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CRAMP1Q96RY5 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CRAMP1Q96RY5 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CRAMP1Q96RY5 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
CRAMP1Q96RY5 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CRAMP1Q96RY5 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
CRAMP1Q96RY5 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
CRAMP1Q96RY5 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CRAMP1Q96RY5 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CRAMP1Q96RY5 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CRAMP1Q96RY5 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
CRAMP1Q96RY5 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CRAMP1Q96RY5 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC18.65■□□□□ 0.58
CRAMP1Q96RY5 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CRAMP1Q96RY5 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CRAMP1Q96RY5 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC18.65■□□□□ 0.58
CRAMP1Q96RY5 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CRAMP1Q96RY5 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC18.65■□□□□ 0.58
CRAMP1Q96RY5 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC18.65■□□□□ 0.58
CRAMP1Q96RY5 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC18.65■□□□□ 0.58
CRAMP1Q96RY5 AC010141.1-201ENST00000411585 623 ntBASIC18.65■□□□□ 0.58
CRAMP1Q96RY5 AL596276.2-201ENST00000447525 331 ntBASIC18.65■□□□□ 0.58
CRAMP1Q96RY5 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC18.65■□□□□ 0.58
CRAMP1Q96RY5 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC18.65■□□□□ 0.58
CRAMP1Q96RY5 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CRAMP1Q96RY5 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC18.65■□□□□ 0.58
CRAMP1Q96RY5 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC18.65■□□□□ 0.58
CRAMP1Q96RY5 MIR5572-201ENST00000583188 137 ntBASIC18.65■□□□□ 0.58
CRAMP1Q96RY5 AL136295.7-201ENST00000619226 1200 ntBASIC18.65■□□□□ 0.58
CRAMP1Q96RY5 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CRAMP1Q96RY5 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CRAMP1Q96RY5 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CRAMP1Q96RY5 ACE-204ENST00000428043 5120 ntTSL 2 BASIC18.65■□□□□ 0.58
CRAMP1Q96RY5 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CRAMP1Q96RY5 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC18.65■□□□□ 0.58
CRAMP1Q96RY5 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC18.65■□□□□ 0.58
CRAMP1Q96RY5 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CRAMP1Q96RY5 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CRAMP1Q96RY5 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CRAMP1Q96RY5 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CRAMP1Q96RY5 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CRAMP1Q96RY5 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
CRAMP1Q96RY5 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CRAMP1Q96RY5 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
CRAMP1Q96RY5 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC18.64■□□□□ 0.58
CRAMP1Q96RY5 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
CRAMP1Q96RY5 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CRAMP1Q96RY5 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CRAMP1Q96RY5 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
CRAMP1Q96RY5 AL157791.1-201ENST00000553667 1699 ntBASIC18.64■□□□□ 0.57
CRAMP1Q96RY5 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CRAMP1Q96RY5 SHC1P1-201ENST00000425230 1745 ntBASIC18.64■□□□□ 0.57
CRAMP1Q96RY5 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CRAMP1Q96RY5 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CRAMP1Q96RY5 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CRAMP1Q96RY5 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
CRAMP1Q96RY5 AC006335.1-201ENST00000445200 547 ntBASIC18.64■□□□□ 0.57
CRAMP1Q96RY5 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CRAMP1Q96RY5 FADS2-212ENST00000522639 360 ntTSL 5 BASIC18.64■□□□□ 0.57
CRAMP1Q96RY5 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC18.64■□□□□ 0.57
CRAMP1Q96RY5 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC18.64■□□□□ 0.57
CRAMP1Q96RY5 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC18.64■□□□□ 0.57
CRAMP1Q96RY5 DUX4L46-201ENST00000566845 751 ntBASIC18.64■□□□□ 0.57
CRAMP1Q96RY5 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC18.64■□□□□ 0.57
CRAMP1Q96RY5 FADS2-215ENST00000574708 385 ntTSL 3 BASIC18.64■□□□□ 0.57
CRAMP1Q96RY5 AC138696.2-201ENST00000607376 223 ntBASIC18.64■□□□□ 0.57
CRAMP1Q96RY5 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
CRAMP1Q96RY5 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CRAMP1Q96RY5 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CRAMP1Q96RY5 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CRAMP1Q96RY5 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
CRAMP1Q96RY5 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC18.64■□□□□ 0.57
CRAMP1Q96RY5 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
CRAMP1Q96RY5 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CRAMP1Q96RY5 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CRAMP1Q96RY5 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC18.63■□□□□ 0.57
CRAMP1Q96RY5 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms