Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRIM47Q96LD4 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRIM47Q96LD4 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC18.14■□□□□ 0.49
TRIM47Q96LD4 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
TRIM47Q96LD4 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRIM47Q96LD4 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRIM47Q96LD4 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TRIM47Q96LD4 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC18.13■□□□□ 0.49
TRIM47Q96LD4 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRIM47Q96LD4 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC18.13■□□□□ 0.49
TRIM47Q96LD4 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TRIM47Q96LD4 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRIM47Q96LD4 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC18.13■□□□□ 0.49
TRIM47Q96LD4 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC18.13■□□□□ 0.49
TRIM47Q96LD4 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRIM47Q96LD4 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
TRIM47Q96LD4 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC18.13■□□□□ 0.49
TRIM47Q96LD4 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TRIM47Q96LD4 CNN2P8-201ENST00000421872 913 ntBASIC18.13■□□□□ 0.49
TRIM47Q96LD4 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC18.13■□□□□ 0.49
TRIM47Q96LD4 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC18.13■□□□□ 0.49
TRIM47Q96LD4 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC18.13■□□□□ 0.49
TRIM47Q96LD4 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC18.13■□□□□ 0.49
TRIM47Q96LD4 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC18.13■□□□□ 0.49
TRIM47Q96LD4 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC18.13■□□□□ 0.49
TRIM47Q96LD4 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC18.13■□□□□ 0.49
TRIM47Q96LD4 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC18.13■□□□□ 0.49
TRIM47Q96LD4 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRIM47Q96LD4 HYMAI-201ENST00000635591 3347 ntBASIC18.13■□□□□ 0.49
TRIM47Q96LD4 TSPY26P-202ENST00000565928 3884 ntBASIC18.13■□□□□ 0.49
TRIM47Q96LD4 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC18.13■□□□□ 0.49
TRIM47Q96LD4 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRIM47Q96LD4 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
TRIM47Q96LD4 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRIM47Q96LD4 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRIM47Q96LD4 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TRIM47Q96LD4 LINC02447-202ENST00000501888 2146 ntBASIC18.13■□□□□ 0.49
TRIM47Q96LD4 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRIM47Q96LD4 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC18.13■□□□□ 0.49
TRIM47Q96LD4 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRIM47Q96LD4 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC18.12■□□□□ 0.49
TRIM47Q96LD4 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
TRIM47Q96LD4 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRIM47Q96LD4 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRIM47Q96LD4 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC18.12■□□□□ 0.49
TRIM47Q96LD4 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRIM47Q96LD4 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRIM47Q96LD4 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRIM47Q96LD4 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC18.12■□□□□ 0.49
TRIM47Q96LD4 CASK-202ENST00000378158 3848 ntTSL 5 BASIC18.12■□□□□ 0.49
TRIM47Q96LD4 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC18.12■□□□□ 0.49
TRIM47Q96LD4 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC18.12■□□□□ 0.49
TRIM47Q96LD4 OARD1-212ENST00000482515 832 ntTSL 2 BASIC18.12■□□□□ 0.49
TRIM47Q96LD4 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TRIM47Q96LD4 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRIM47Q96LD4 NEU3-202ENST00000526068 431 ntTSL 2 BASIC18.12■□□□□ 0.49
TRIM47Q96LD4 ACTG1P17-201ENST00000558391 1119 ntBASIC18.12■□□□□ 0.49
TRIM47Q96LD4 AC079328.1-201ENST00000560358 952 ntBASIC18.12■□□□□ 0.49
TRIM47Q96LD4 LARP4-220ENST00000615080 856 ntTSL 5 BASIC18.12■□□□□ 0.49
TRIM47Q96LD4 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TRIM47Q96LD4 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC18.12■□□□□ 0.49
TRIM47Q96LD4 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC18.12■□□□□ 0.49
TRIM47Q96LD4 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TRIM47Q96LD4 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC18.12■□□□□ 0.49
TRIM47Q96LD4 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRIM47Q96LD4 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRIM47Q96LD4 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRIM47Q96LD4 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TRIM47Q96LD4 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TRIM47Q96LD4 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRIM47Q96LD4 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TRIM47Q96LD4 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC18.11■□□□□ 0.49
TRIM47Q96LD4 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TRIM47Q96LD4 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRIM47Q96LD4 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
TRIM47Q96LD4 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TRIM47Q96LD4 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC18.11■□□□□ 0.49
TRIM47Q96LD4 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
TRIM47Q96LD4 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRIM47Q96LD4 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRIM47Q96LD4 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRIM47Q96LD4 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
TRIM47Q96LD4 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC18.11■□□□□ 0.49
TRIM47Q96LD4 MIR663B-201ENST00000408361 115 ntBASIC18.11■□□□□ 0.49
TRIM47Q96LD4 C2orf27AP3-201ENST00000434123 579 ntBASIC18.11■□□□□ 0.49
TRIM47Q96LD4 PFN2-215ENST00000497148 743 ntTSL 4 BASIC18.11■□□□□ 0.49
TRIM47Q96LD4 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TRIM47Q96LD4 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC18.11■□□□□ 0.49
TRIM47Q96LD4 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC18.11■□□□□ 0.49
TRIM47Q96LD4 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC18.11■□□□□ 0.49
TRIM47Q96LD4 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
TRIM47Q96LD4 AL354718.3-201ENST00000616414 581 ntBASIC18.11■□□□□ 0.49
TRIM47Q96LD4 CR382287.1-201ENST00000623954 586 ntBASIC18.11■□□□□ 0.49
TRIM47Q96LD4 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC18.11■□□□□ 0.49
TRIM47Q96LD4 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRIM47Q96LD4 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC18.11■□□□□ 0.49
TRIM47Q96LD4 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC18.11■□□□□ 0.49
TRIM47Q96LD4 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRIM47Q96LD4 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRIM47Q96LD4 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms