Protein–RNA interactions for Protein: Q96FS4

SIPA1, Signal-induced proliferation-associated protein 1, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1Q96FS4 AC092850.2-201ENST00000623821 2697 ntBASIC15.53■□□□□ 0.08
SIPA1Q96FS4 AL138709.1-201ENST00000614840 1693 ntBASIC15.53■□□□□ 0.08
SIPA1Q96FS4 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SIPA1Q96FS4 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SIPA1Q96FS4 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
SIPA1Q96FS4 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SIPA1Q96FS4 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
SIPA1Q96FS4 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SIPA1Q96FS4 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SIPA1Q96FS4 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
SIPA1Q96FS4 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
SIPA1Q96FS4 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
SIPA1Q96FS4 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SIPA1Q96FS4 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
SIPA1Q96FS4 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC15.53■□□□□ 0.08
SIPA1Q96FS4 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
SIPA1Q96FS4 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
SIPA1Q96FS4 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC15.52■□□□□ 0.08
SIPA1Q96FS4 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
SIPA1Q96FS4 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SIPA1Q96FS4 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SIPA1Q96FS4 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
SIPA1Q96FS4 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SIPA1Q96FS4 AHCYP2-201ENST00000430630 1300 ntBASIC15.52■□□□□ 0.08
SIPA1Q96FS4 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC15.52■□□□□ 0.08
SIPA1Q96FS4 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC15.52■□□□□ 0.08
SIPA1Q96FS4 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC15.52■□□□□ 0.08
SIPA1Q96FS4 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC15.52■□□□□ 0.08
SIPA1Q96FS4 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
SIPA1Q96FS4 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC15.52■□□□□ 0.08
SIPA1Q96FS4 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.08
SIPA1Q96FS4 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
SIPA1Q96FS4 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
SIPA1Q96FS4 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
SIPA1Q96FS4 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC15.52■□□□□ 0.08
SIPA1Q96FS4 NUS1P3-201ENST00000423502 862 ntBASIC15.52■□□□□ 0.08
SIPA1Q96FS4 OLR1-203ENST00000432556 950 ntTSL 2 BASIC15.52■□□□□ 0.08
SIPA1Q96FS4 AC114812.1-204ENST00000449669 728 ntBASIC15.52■□□□□ 0.08
SIPA1Q96FS4 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC15.52■□□□□ 0.08
SIPA1Q96FS4 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
SIPA1Q96FS4 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC15.52■□□□□ 0.08
SIPA1Q96FS4 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC15.52■□□□□ 0.08
SIPA1Q96FS4 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
SIPA1Q96FS4 CD74-212ENST00000524315 584 ntTSL 5 BASIC15.52■□□□□ 0.08
SIPA1Q96FS4 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
SIPA1Q96FS4 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SIPA1Q96FS4 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC15.52■□□□□ 0.08
SIPA1Q96FS4 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC15.52■□□□□ 0.08
SIPA1Q96FS4 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC15.52■□□□□ 0.08
SIPA1Q96FS4 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC15.52■□□□□ 0.08
SIPA1Q96FS4 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC15.52■□□□□ 0.08
SIPA1Q96FS4 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC15.52■□□□□ 0.08
SIPA1Q96FS4 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC15.52■□□□□ 0.08
SIPA1Q96FS4 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC15.52■□□□□ 0.08
SIPA1Q96FS4 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
SIPA1Q96FS4 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC15.52■□□□□ 0.07
SIPA1Q96FS4 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
SIPA1Q96FS4 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
SIPA1Q96FS4 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
SIPA1Q96FS4 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
SIPA1Q96FS4 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC15.52■□□□□ 0.07
SIPA1Q96FS4 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
SIPA1Q96FS4 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
SIPA1Q96FS4 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.07
SIPA1Q96FS4 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
SIPA1Q96FS4 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
SIPA1Q96FS4 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
SIPA1Q96FS4 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC15.52■□□□□ 0.07
SIPA1Q96FS4 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC15.52■□□□□ 0.07
SIPA1Q96FS4 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
SIPA1Q96FS4 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SIPA1Q96FS4 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SIPA1Q96FS4 FOS-202ENST00000535987 1402 ntTSL 2 BASIC15.51■□□□□ 0.07
SIPA1Q96FS4 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC15.51■□□□□ 0.07
SIPA1Q96FS4 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SIPA1Q96FS4 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SIPA1Q96FS4 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
SIPA1Q96FS4 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC15.51■□□□□ 0.07
SIPA1Q96FS4 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
SIPA1Q96FS4 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
SIPA1Q96FS4 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
SIPA1Q96FS4 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC15.51■□□□□ 0.07
SIPA1Q96FS4 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SIPA1Q96FS4 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
SIPA1Q96FS4 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC15.51■□□□□ 0.07
SIPA1Q96FS4 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC15.51■□□□□ 0.07
SIPA1Q96FS4 KLF2P2-201ENST00000416807 1039 ntBASIC15.51■□□□□ 0.07
SIPA1Q96FS4 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
SIPA1Q96FS4 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC15.51■□□□□ 0.07
SIPA1Q96FS4 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC15.51■□□□□ 0.07
SIPA1Q96FS4 RNA5SP486-201ENST00000515961 83 ntBASIC15.51■□□□□ 0.07
SIPA1Q96FS4 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SIPA1Q96FS4 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC15.51■□□□□ 0.07
SIPA1Q96FS4 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SIPA1Q96FS4 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC15.51■□□□□ 0.07
SIPA1Q96FS4 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC15.51■□□□□ 0.07
SIPA1Q96FS4 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SIPA1Q96FS4 AC244093.1-201ENST00000610837 814 ntBASIC15.51■□□□□ 0.07
SIPA1Q96FS4 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SIPA1Q96FS4 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms