Protein–RNA interactions for Protein: Q969W0

SPTSSA, Serine palmitoyltransferase small subunit A, humanhuman

Predictions only

Length 71 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSAQ969W0 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SPTSSAQ969W0 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SPTSSAQ969W0 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
SPTSSAQ969W0 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SPTSSAQ969W0 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC13.62□□□□□ -0.23
SPTSSAQ969W0 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC13.62□□□□□ -0.23
SPTSSAQ969W0 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
SPTSSAQ969W0 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
SPTSSAQ969W0 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SPTSSAQ969W0 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SPTSSAQ969W0 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
SPTSSAQ969W0 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SPTSSAQ969W0 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SPTSSAQ969W0 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SPTSSAQ969W0 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SPTSSAQ969W0 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SPTSSAQ969W0 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC13.62□□□□□ -0.23
SPTSSAQ969W0 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SPTSSAQ969W0 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SPTSSAQ969W0 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SPTSSAQ969W0 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SPTSSAQ969W0 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC13.62□□□□□ -0.23
SPTSSAQ969W0 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC13.62□□□□□ -0.23
SPTSSAQ969W0 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC13.62□□□□□ -0.23
SPTSSAQ969W0 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC13.62□□□□□ -0.23
SPTSSAQ969W0 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
SPTSSAQ969W0 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC13.62□□□□□ -0.23
SPTSSAQ969W0 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC13.62□□□□□ -0.23
SPTSSAQ969W0 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC13.62□□□□□ -0.23
SPTSSAQ969W0 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC13.62□□□□□ -0.23
SPTSSAQ969W0 AL158211.3-201ENST00000607385 239 ntBASIC13.62□□□□□ -0.23
SPTSSAQ969W0 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SPTSSAQ969W0 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC13.62□□□□□ -0.23
SPTSSAQ969W0 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC13.62□□□□□ -0.23
SPTSSAQ969W0 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC13.62□□□□□ -0.23
SPTSSAQ969W0 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
SPTSSAQ969W0 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC13.62□□□□□ -0.23
SPTSSAQ969W0 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC13.62□□□□□ -0.23
SPTSSAQ969W0 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC13.62□□□□□ -0.23
SPTSSAQ969W0 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC13.62□□□□□ -0.23
SPTSSAQ969W0 DEK-201ENST00000244776 1441 ntTSL 2 BASIC13.62□□□□□ -0.23
SPTSSAQ969W0 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
SPTSSAQ969W0 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SPTSSAQ969W0 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SPTSSAQ969W0 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SPTSSAQ969W0 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SPTSSAQ969W0 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SPTSSAQ969W0 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
SPTSSAQ969W0 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SPTSSAQ969W0 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SPTSSAQ969W0 CTBP1-AS2-206ENST00000581398 5652 ntBASIC13.62□□□□□ -0.23
SPTSSAQ969W0 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SPTSSAQ969W0 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
SPTSSAQ969W0 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SPTSSAQ969W0 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SPTSSAQ969W0 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SPTSSAQ969W0 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC13.61□□□□□ -0.23
SPTSSAQ969W0 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
SPTSSAQ969W0 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
SPTSSAQ969W0 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC13.61□□□□□ -0.23
SPTSSAQ969W0 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SPTSSAQ969W0 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC13.61□□□□□ -0.23
SPTSSAQ969W0 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SPTSSAQ969W0 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC13.61□□□□□ -0.23
SPTSSAQ969W0 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC13.61□□□□□ -0.23
SPTSSAQ969W0 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SPTSSAQ969W0 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC13.61□□□□□ -0.23
SPTSSAQ969W0 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SPTSSAQ969W0 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SPTSSAQ969W0 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC13.61□□□□□ -0.23
SPTSSAQ969W0 AC074338.1-201ENST00000416825 156 ntBASIC13.61□□□□□ -0.23
SPTSSAQ969W0 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC13.61□□□□□ -0.23
SPTSSAQ969W0 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC13.61□□□□□ -0.23
SPTSSAQ969W0 URGCP-206ENST00000446958 365 ntTSL 2 BASIC13.61□□□□□ -0.23
SPTSSAQ969W0 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC13.61□□□□□ -0.23
SPTSSAQ969W0 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SPTSSAQ969W0 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC13.61□□□□□ -0.23
SPTSSAQ969W0 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC13.61□□□□□ -0.23
SPTSSAQ969W0 AL512361.1-201ENST00000554200 418 ntBASIC13.61□□□□□ -0.23
SPTSSAQ969W0 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SPTSSAQ969W0 AC010336.2-201ENST00000564226 506 ntBASIC13.61□□□□□ -0.23
SPTSSAQ969W0 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC13.61□□□□□ -0.23
SPTSSAQ969W0 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC13.61□□□□□ -0.23
SPTSSAQ969W0 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC13.61□□□□□ -0.23
SPTSSAQ969W0 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
SPTSSAQ969W0 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC13.61□□□□□ -0.23
SPTSSAQ969W0 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
SPTSSAQ969W0 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
SPTSSAQ969W0 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
SPTSSAQ969W0 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SPTSSAQ969W0 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SPTSSAQ969W0 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SPTSSAQ969W0 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC13.61□□□□□ -0.23
SPTSSAQ969W0 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
SPTSSAQ969W0 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SPTSSAQ969W0 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SPTSSAQ969W0 TCAF2P1-201ENST00000291129 2421 ntBASIC13.61□□□□□ -0.23
SPTSSAQ969W0 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
SPTSSAQ969W0 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC13.61□□□□□ -0.23
SPTSSAQ969W0 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms