Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC16.4■□□□□ 0.22
ATP2A3Q93084 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC16.4■□□□□ 0.22
ATP2A3Q93084 AC015936.2-201ENST00000593177 259 ntBASIC16.4■□□□□ 0.22
ATP2A3Q93084 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
ATP2A3Q93084 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
ATP2A3Q93084 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC16.4■□□□□ 0.22
ATP2A3Q93084 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ATP2A3Q93084 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
ATP2A3Q93084 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
ATP2A3Q93084 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC16.4■□□□□ 0.22
ATP2A3Q93084 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
ATP2A3Q93084 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ATP2A3Q93084 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC16.4■□□□□ 0.22
ATP2A3Q93084 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
ATP2A3Q93084 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ATP2A3Q93084 ZBTB45P2-201ENST00000452245 1531 ntBASIC16.4■□□□□ 0.22
ATP2A3Q93084 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC16.4■□□□□ 0.22
ATP2A3Q93084 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ATP2A3Q93084 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
ATP2A3Q93084 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC16.39■□□□□ 0.22
ATP2A3Q93084 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
ATP2A3Q93084 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
ATP2A3Q93084 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ATP2A3Q93084 BNIP3P1-202ENST00000550043 1585 ntBASIC16.39■□□□□ 0.21
ATP2A3Q93084 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
ATP2A3Q93084 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC16.39■□□□□ 0.21
ATP2A3Q93084 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
ATP2A3Q93084 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
ATP2A3Q93084 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
ATP2A3Q93084 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
ATP2A3Q93084 GRN-214ENST00000589265 1632 ntTSL 5 BASIC16.39■□□□□ 0.21
ATP2A3Q93084 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ATP2A3Q93084 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
ATP2A3Q93084 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ATP2A3Q93084 PKIG-203ENST00000372887 769 ntTSL 3 BASIC16.39■□□□□ 0.21
ATP2A3Q93084 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC16.39■□□□□ 0.21
ATP2A3Q93084 MIR1909-201ENST00000411312 80 ntBASIC16.39■□□□□ 0.21
ATP2A3Q93084 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
ATP2A3Q93084 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
ATP2A3Q93084 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC16.39■□□□□ 0.21
ATP2A3Q93084 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC16.39■□□□□ 0.21
ATP2A3Q93084 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC16.39■□□□□ 0.21
ATP2A3Q93084 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC16.39■□□□□ 0.21
ATP2A3Q93084 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC16.39■□□□□ 0.21
ATP2A3Q93084 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
ATP2A3Q93084 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
ATP2A3Q93084 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
ATP2A3Q93084 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
ATP2A3Q93084 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
ATP2A3Q93084 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC16.39■□□□□ 0.21
ATP2A3Q93084 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
ATP2A3Q93084 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC16.39■□□□□ 0.21
ATP2A3Q93084 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ATP2A3Q93084 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
ATP2A3Q93084 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
ATP2A3Q93084 AP003680.1-201ENST00000598970 3660 ntBASIC16.39■□□□□ 0.21
ATP2A3Q93084 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
ATP2A3Q93084 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ATP2A3Q93084 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC16.39■□□□□ 0.21
ATP2A3Q93084 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ATP2A3Q93084 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC16.39■□□□□ 0.21
ATP2A3Q93084 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
ATP2A3Q93084 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ATP2A3Q93084 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC16.38■□□□□ 0.21
ATP2A3Q93084 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ATP2A3Q93084 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
ATP2A3Q93084 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
ATP2A3Q93084 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
ATP2A3Q93084 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
ATP2A3Q93084 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
ATP2A3Q93084 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ATP2A3Q93084 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ATP2A3Q93084 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC16.38■□□□□ 0.21
ATP2A3Q93084 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
ATP2A3Q93084 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ATP2A3Q93084 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC16.38■□□□□ 0.21
ATP2A3Q93084 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC16.38■□□□□ 0.21
ATP2A3Q93084 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC16.38■□□□□ 0.21
ATP2A3Q93084 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ATP2A3Q93084 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ATP2A3Q93084 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC16.38■□□□□ 0.21
ATP2A3Q93084 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC16.38■□□□□ 0.21
ATP2A3Q93084 AP001282.1-201ENST00000531301 1499 ntBASIC16.38■□□□□ 0.21
ATP2A3Q93084 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ATP2A3Q93084 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
ATP2A3Q93084 AC234783.1-201ENST00000441761 496 ntBASIC16.38■□□□□ 0.21
ATP2A3Q93084 GALT-202ENST00000450095 1280 ntTSL 2 BASIC16.38■□□□□ 0.21
ATP2A3Q93084 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC16.38■□□□□ 0.21
ATP2A3Q93084 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC16.38■□□□□ 0.21
ATP2A3Q93084 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
ATP2A3Q93084 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC16.38■□□□□ 0.21
ATP2A3Q93084 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC16.38■□□□□ 0.21
ATP2A3Q93084 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC16.38■□□□□ 0.21
ATP2A3Q93084 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC16.38■□□□□ 0.21
ATP2A3Q93084 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC16.38■□□□□ 0.21
ATP2A3Q93084 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC16.38■□□□□ 0.21
ATP2A3Q93084 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
ATP2A3Q93084 AL391069.4-201ENST00000609583 481 ntBASIC16.38■□□□□ 0.21
ATP2A3Q93084 AL158212.4-201ENST00000624062 1286 ntBASIC16.38■□□□□ 0.21
ATP2A3Q93084 SERF2-217ENST00000630046 862 ntTSL 5 BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms